gene25163-v1.0-hybrid (Fragaria vesca)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 gene25163-v1.0-hybrid T297990_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac058
M00886_2.00
Arabidopsis thaliana
CGTTGTCT

AGACAACG
PBM
Franco-Zorrilla et al.(2014)
ANAC58
0.898 0.877
anac058
M07210_2.00
Arabidopsis thaliana
CKTGHNNNRCAMGYWA

TWRCKTGYNNNDCAMG
Dap-seq
OMalley et al.(2016)
ANAC058_col_a
0.898 0.877
anac058
M07211_2.00
Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA

TDDCKTGHNNNDCAMGHA
Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a
0.898 0.877
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna25163.1-v1.0-hybrid NAC/NAM 6 130

Links

Other NAC/NAM family TFs
Other Fragaria vesca TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRUPE_ppa007839mg Prunus persica PRUPE_ppa007839mg I 0.950
GLYMA07G10240 Glycine max GLYMA07G10240 I 0.950
MTR_6g084430 Medicago truncatula MTR_6g084430 N 0.945
GLYMA08G04610 Glycine max GLYMA08G04610 N 0.943
GLYMA05G35090 Glycine max GLYMA05G35090 N 0.942
Ca_13012 Cicer arietinum Ca_13012 N 0.942
GLYMA09G31650 Glycine max GLYMA09G31650 N 0.933
Pm025184 Prunus mume Pm025184 N 0.931
cassava9086.m1 Manihot esculenta cassava9086.m1 I 0.919
MDP0000246482 Malus domestica MDP0000246482 I 0.918
MDP0000153949 Malus domestica MDP0000153949 I 0.918
Ciclev10023578m.g Citrus clementina Ciclev10023578m.g I 0.918
POPTR_0015s03700 Populus trichocarpa POPTR_0015s03700 I 0.918
Cla019261 Citrullus lanatus Cla019261 N 0.917
SapurV1A.1146s0010 Salix purpurea SapurV1A.1146s0010 I 0.914
SapurV1A.1381s0050 Salix purpurea SapurV1A.1381s0050 I 0.913
SapurV1A.1381s0060 Salix purpurea SapurV1A.1381s0060 I 0.913
Eucgr.B00724 Eucalyptus grandis Eucgr.B00724 I 0.911
POPTR_0012s05280 Populus trichocarpa POPTR_0012s05280 I 0.910
29974.m000235 Ricinus communis 29974.m000235 I 0.909
SapurV1A.0719s0060 Salix purpurea SapurV1A.0719s0060 I 0.906
Cucsa.199090 Cucumis sativus Cucsa.199090 N 0.905
Gorai.006G060900 Gossypium raimondii Gorai.006G060900 I 0.903
Thhalv10021200m.g Eutrema salsugineum Thhalv10021200m.g I 0.903
TCM_012350 Theobroma cacao TCM_012350 I 0.902
evm.TU.supercontig_3.509 Carica papaya evm.TU.supercontig_3.509 I 0.899
Bo01320s020 Brassica oleracea Bo01320s020 I 0.898
anac058 Arabidopsis thaliana AT3G18400 D 0.898
Aquca_026_00305 Aquilegia coerulea Aquca_026_00305 I 0.898
anac058 Arabidopsis lyrata Al_scaffold_0003_1942 I 0.898
Bra022319 Brassica rapa Bra022319 I 0.898
Bo3g071500 Brassica oleracea Bo3g071500 I 0.898
Bra001705 Brassica rapa Bra001705 I 0.898
Bostr.19424s0822 Boechera stricta Bostr.19424s0822 I 0.895
cassava2919.m1 Manihot esculenta cassava2919.m1 I 0.893
Cagra.1681s0009 Capsella grandiflora Cagra.1681s0009 I 0.892
anac058 Vitis vinifera VIT_17s0000g03660 I 0.890
Bostr.26675s0262 Boechera stricta Bostr.26675s0262 I 0.888
Bra037585 Brassica rapa Bra037585 I 0.887
Bo1g117610 Brassica oleracea Bo1g117610 I 0.887
OPUNC03G24220 Oryza punctata OPUNC03G24220 I 0.884
Pavir.Ib03976 Panicum virgatum Pavir.Ib03976 I 0.883
Eucgr.K02225 Eucalyptus grandis Eucgr.K02225 I 0.883
mgf021065m Mimulus guttatus mgf021065m I 0.882
Carubv10015990m.g Capsella rubella Carubv10015990m.g I 0.882
Pavir.Ia01262 Panicum virgatum Pavir.Ia01262 I 0.881
Si036535m.g Setaria italica Si036535m.g I 0.880
GSMUA_Achr10G19900_001 Musa acuminata GSMUA_Achr10G19900_001 I 0.880
GSMUA_Achr8G18420_001 Musa acuminata GSMUA_Achr8G18420_001 I 0.878
Thhalv10013863m.g Eutrema salsugineum Thhalv10013863m.g I 0.876
Bo9g113820 Brassica oleracea Bo9g113820 I 0.876
AMTR_s00079p00099620 Amborella trichopoda AMTR_s00079p00099620 I 0.875
Thhalv10011708m.g Eutrema salsugineum Thhalv10011708m.g I 0.874
Sb01g014310 Sorghum bicolor Sb01g014310 I 0.873
LPERR03G21900 Leersia perrieri LPERR03G21900 I 0.872