Gorai.003G073300 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.003G073300 T298057_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NTL9
M02371_2.00 		Arabidopsis thaliana
ATTACTTAA
TTAAGTAAT		 PBM
Weirauch et al.(2014)
pTH8207 		0.876 0.868
NTL9
M11081_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBNAC_01 		0.876 0.868
NTL9
M11082_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBNAC_02 		0.876 0.868
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G073300.1 NAC/NAM 10 136
Gorai.003G073300.2 NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0285s0090 Salix purpurea SapurV1A.0285s0090 I 0.954
Gorai.008G261400 Gossypium raimondii Gorai.008G261400 I 0.947
TCM_015584 Theobroma cacao TCM_015584 I 0.946
PK02019.1 Cannabis sativa PK02019.1 I 0.935
SapurV1A.0666s0060 Salix purpurea SapurV1A.0666s0060 N 0.934
evm.TU.supercontig_37.112 Carica papaya evm.TU.supercontig_37.112 I 0.932
30068.m002619 Ricinus communis 30068.m002619 I 0.931
Lus10008285.g Linum usitatissimum Lus10008285.g I 0.930
Lus10033251.g Linum usitatissimum Lus10033251.g I 0.930
POPTR_0011s15230 Populus trichocarpa POPTR_0011s15230 I 0.927
POPTR_0001s45700 Populus trichocarpa POPTR_0001s45700 I 0.926
VIT_02s0025g03020 Vitis vinifera VIT_02s0025g03020 I 0.926
Eucgr.E01095 Eucalyptus grandis Eucgr.E01095 I 0.920
Ciclev10019282m.g Citrus clementina Ciclev10019282m.g I 0.916
NAC014 Arabidopsis thaliana AT1G33060 I 0.916
Bo5g086780 Brassica oleracea Bo5g086780 I 0.916
Thhalv10007021m.g Eutrema salsugineum Thhalv10007021m.g I 0.916
orange1.1g009388m.g Citrus sinensis orange1.1g009388m.g I 0.916
Bra010193 Brassica rapa Bra010193 I 0.916
Carubv10008529m.g Capsella rubella Carubv10008529m.g I 0.915
Cagra.1443s0001 Capsella grandiflora Cagra.1443s0001 I 0.915
Bostr.3359s0059 Boechera stricta Bostr.3359s0059 I 0.915
Pm029581 Prunus mume Pm029581 I 0.914
PRUPE_ppa001291mg Prunus persica PRUPE_ppa001291mg I 0.914
ANAC014 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002639 I 0.913
mgf022344m Mimulus guttatus mgf022344m I 0.908
MDP0000266908 Malus domestica MDP0000266908 I 0.907
Lus10010148.g Linum usitatissimum Lus10010148.g I 0.899
gene01851-v1.0-hybrid Fragaria vesca gene01851-v1.0-hybrid I 0.899
cassava11768.valid.m1 Manihot esculenta cassava11768.valid.m1 N 0.895
29764.m000758 Ricinus communis 29764.m000758 N 0.892
MDP0000658409 Malus domestica MDP0000658409 I 0.892
SapurV1A.0326s0320 Salix purpurea SapurV1A.0326s0320 N 0.879
Cagra.2350s0100 Capsella grandiflora Cagra.2350s0100 I 0.876
NTL9 Arabidopsis lyrata fgenesh2_kg.7__521__AT4G35580.1 I 0.876
NTL9 Arabidopsis thaliana AT4G35580 D 0.876
Bostr.7867s1416 Boechera stricta Bostr.7867s1416 I 0.876
Carubv10007613m.g Capsella rubella Carubv10007613m.g I 0.876
POPTR_0012s00760 Populus trichocarpa POPTR_0012s00760 N 0.871