Gorai.007G267900 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.007G267900 T298119_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC047
M07198_2.00
Arabidopsis thaliana
CACGB

VCGTG
Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a
0.905 0.836
NAC047
M07199_2.00
Arabidopsis thaliana
WNNNWYACGYMWYYN

NRRWKRCGTRWNNNW
Dap-seq
OMalley et al.(2016)
ANAC047_col
0.905 0.836
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G267900.1 NAC/NAM 11 171
Gorai.007G267900.2 NAC/NAM 11 144

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0019s04690 Populus trichocarpa POPTR_0019s04690 I 0.942
TCM_026030 Theobroma cacao TCM_026030 I 0.940
SapurV1A.1058s0080 Salix purpurea SapurV1A.1058s0080 I 0.937
SapurV1A.2115s0010 Salix purpurea SapurV1A.2115s0010 I 0.937
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I 0.934
cassava35701.valid.m1 Manihot esculenta cassava35701.valid.m1 I 0.934
Ciclev10020717m.g Citrus clementina Ciclev10020717m.g I 0.934
29950.m001173 Ricinus communis 29950.m001173 I 0.929
Gorai.013G191800 Gossypium raimondii Gorai.013G191800 I 0.928
anac047 Vitis vinifera VIT_08s0007g07670 I 0.924
Thhalv10021011m.g Eutrema salsugineum Thhalv10021011m.g I 0.923
cassava22631.valid.m1 Manihot esculenta cassava22631.valid.m1 I 0.920
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I 0.918
Lus10042531.g Linum usitatissimum Lus10042531.g I 0.917
SapurV1A.1196s0040 Salix purpurea SapurV1A.1196s0040 I 0.916
SapurV1A.0867s0160 Salix purpurea SapurV1A.0867s0160 I 0.916
Eucgr.A02070 Eucalyptus grandis Eucgr.A02070 I 0.911
Bostr.2570s0301 Boechera stricta Bostr.2570s0301 I 0.909
Lus10006547.g Linum usitatissimum Lus10006547.g I 0.909
anac047 Arabidopsis lyrata fgenesh2_kg.3__367__AT3G04070.1 I 0.909
NAC047 Arabidopsis thaliana AT3G04070 D 0.908
Cagra.2026s0001 Capsella grandiflora Cagra.2026s0001 I 0.906
Carubv10014000m.g Capsella rubella Carubv10014000m.g I 0.906
30078.m002348 Ricinus communis 30078.m002348 I 0.902
LPERR03G13950 Leersia perrieri LPERR03G13950 I 0.900
Lus10003269.g Linum usitatissimum Lus10003269.g I 0.900
OB03G25680 Oryza brachyantha OB03G25680 I 0.898
OPUNC07G25060 Oryza punctata OPUNC07G25060 I 0.895
Bra040152 Brassica rapa Bra040152 I 0.893
Bo1g152220 Brassica oleracea Bo1g152220 I 0.893
GRMZM2G011598 Zea mays GRMZM2G011598 I 0.891
MDP0000180683 Malus domestica MDP0000180683 I 0.890
Pm025312 Prunus mume Pm025312 I 0.890
PRUPE_ppa007445mg Prunus persica PRUPE_ppa007445mg I 0.890
GRMZM2G042494 Zea mays GRMZM2G042494 I 0.889
GLYMA16G26740 Glycine max GLYMA16G26740 I 0.889
Bra031949 Brassica rapa Bra031949 I 0.887
Sb01g036560 Sorghum bicolor Sb01g036560 I 0.886
Bo5g148420 Brassica oleracea Bo5g148420 I 0.886
PK06287.1 Cannabis sativa PK06287.1 N 0.885
TRIUR3_29857 Triticum urartu TRIUR3_29857 I 0.883
F775_02308 Aegilops tauschii F775_02308 I 0.883
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.883
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.883
Traes_4DL_F0BE36C9D Triticum aestivum Traes_4DL_F0BE36C9D I 0.883
MLOC_65101 Hordeum vulgare MLOC_65101 I 0.883
Traes_4AS_DBDA5E9C6 Triticum aestivum Traes_4AS_DBDA5E9C6 I 0.883
OGLUM03G16100 Oryza glumaepatula OGLUM03G16100 I 0.881
MDP0000404409 Malus domestica MDP0000404409 I 0.881
BRADI1G17480 Brachypodium distachyon BRADI1G17480 I 0.881
OBART03G15960 Oryza barthii OBART03G15960 I 0.881
OMERI03G14270 Oryza meridionalis OMERI03G14270 I 0.881
ORGLA03G0152700 Oryza glaberrima ORGLA03G0152700 I 0.881
ORUFI03G16510 Oryza rufipogon ORUFI03G16510 I 0.881
ONIVA03G16920 Oryza nivara ONIVA03G16920 I 0.881
Bo1g128420 Brassica oleracea Bo1g128420 I 0.881
Bra021114 Brassica rapa Bra021114 I 0.881
OLONG_005610 Oryza longistaminata OLONG_005610 I 0.881
MDP0000674514 Malus domestica MDP0000674514 I 0.880
Thhalv10012308m.g Eutrema salsugineum Thhalv10012308m.g I 0.879
GLYMA12G22790 Glycine max GLYMA12G22790 I 0.877
BGIOSGA026407 Oryza indica BGIOSGA026407 I 0.876
Pavir.J22666 Panicum virgatum Pavir.J22666 I 0.876
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.876
OMERI07G23240 Oryza meridionalis OMERI07G23240 I 0.876
ONIVA07G26310 Oryza nivara ONIVA07G26310 I 0.876
ORGLA07G0209600 Oryza glaberrima ORGLA07G0209600 I 0.876
OS03G0327800 Oryza sativa OS03G0327800 I 0.876
OGLUM07G26630 Oryza glumaepatula OGLUM07G26630 I 0.876
OGLUM07G26640 Oryza glumaepatula OGLUM07G26640 I 0.876
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.876
ORUFI07G27590 Oryza rufipogon ORUFI07G27590 I 0.876
OBART07G26600 Oryza barthii OBART07G26600 I 0.876
OLONG_012944 Oryza longistaminata OLONG_012944 I 0.874
Traes_2BS_C116E5668 Triticum aestivum Traes_2BS_C116E5668 I 0.872
Traes_2BS_924D34AA1 Triticum aestivum Traes_2BS_924D34AA1 I 0.872
GLYMA06G38440 Glycine max GLYMA06G38440 I 0.871
GLYMA07G31220 Glycine max GLYMA07G31220 I 0.871