Gorai.009G260000 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.009G260000 T298141_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANAC13
M07170_2.00
Arabidopsis thaliana
TDNCTTGYYNNNCAAG

CTTGNNNRRCAAGNHA
Dap-seq
OMalley et al.(2016)
ANAC013_col_a
0.880 0.734
ANAC13
M07171_2.00
Arabidopsis thaliana
CTTGYBHNNCAAGNHAH

DTDNCTTGNNDVRCAAG
Dap-seq
OMalley et al.(2016)
ANAC013_colamp_a
0.880 0.734
ANAC13
M11077_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC013_Q2
0.880 0.734
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH

DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.876 0.679
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA

TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.876 0.679
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G260000.1 NAC/NAM 21 147
Gorai.009G260000.2 NAC/NAM 21 147
Gorai.009G260000.3 NAC/NAM 21 147
Gorai.009G260000.4 NAC/NAM 21 147

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action