Lus10003269.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10003269.g T298195_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC047
M07198_2.00 		Arabidopsis thaliana
CACGB
VCGTG		 Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a 		0.888 0.848
NAC047
M07199_2.00 		Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW		 Dap-seq
OMalley et al.(2016)
ANAC047_col 		0.888 0.848
NAC018
M07176_2.00 		Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH		 Dap-seq
OMalley et al.(2016)
NAM_colamp_a 		0.886 0.750
NAC018
M07177_2.00 		Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW		 Dap-seq
OMalley et al.(2016)
NAM_col_v3a 		0.886 0.750
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10003269 NAC/NAM 15 142

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10006547.g Linum usitatissimum Lus10006547.g I 0.950
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I 0.940
Lus10042531.g Linum usitatissimum Lus10042531.g I 0.936
SapurV1A.0867s0160 Salix purpurea SapurV1A.0867s0160 I 0.931
SapurV1A.1196s0040 Salix purpurea SapurV1A.1196s0040 I 0.931
cassava22631.valid.m1 Manihot esculenta cassava22631.valid.m1 I 0.924
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I 0.923
Ciclev10020717m.g Citrus clementina Ciclev10020717m.g I 0.923
Bo5g148420 Brassica oleracea Bo5g148420 I 0.921
Gorai.013G191800 Gossypium raimondii Gorai.013G191800 I 0.921
TCM_026030 Theobroma cacao TCM_026030 I 0.919
29950.m001173 Ricinus communis 29950.m001173 I 0.919
Bostr.2570s0301 Boechera stricta Bostr.2570s0301 I 0.918
Carubv10014000m.g Capsella rubella Carubv10014000m.g I 0.918
anac047 Arabidopsis lyrata fgenesh2_kg.3__367__AT3G04070.1 I 0.918
Cagra.2026s0001 Capsella grandiflora Cagra.2026s0001 I 0.918
cassava35701.valid.m1 Manihot esculenta cassava35701.valid.m1 I 0.917
POPTR_0019s04690 Populus trichocarpa POPTR_0019s04690 I 0.915
SapurV1A.1058s0080 Salix purpurea SapurV1A.1058s0080 I 0.914
SapurV1A.2115s0010 Salix purpurea SapurV1A.2115s0010 I 0.914
Eucgr.K01471 Eucalyptus grandis Eucgr.K01471 N 0.913
MDP0000674514 Malus domestica MDP0000674514 I 0.905
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.904
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.904
anac025 Vitis vinifera VIT_00s0375g00040 I 0.901
Gorai.007G267900 Gossypium raimondii Gorai.007G267900 I 0.900
Bo1g152220 Brassica oleracea Bo1g152220 I 0.896
GLYMA07G31220 Glycine max GLYMA07G31220 I 0.896
Bra040152 Brassica rapa Bra040152 I 0.896
GLYMA19G28476 Glycine max GLYMA19G28476 I 0.895
anac047 Vitis vinifera VIT_08s0007g07670 I 0.893
Thhalv10021011m.g Eutrema salsugineum Thhalv10021011m.g I 0.890
GLYMA16G04740 Glycine max GLYMA16G04740 I 0.889
NAC047 Arabidopsis thaliana AT3G04070 D 0.888
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.887
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.887
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.886
NAC018 Arabidopsis thaliana AT1G52880 D 0.886
Bra031949 Brassica rapa Bra031949 I 0.886
GLYMA12G22790 Glycine max GLYMA12G22790 I 0.883
Bra021114 Brassica rapa Bra021114 I 0.882
Bo1g128420 Brassica oleracea Bo1g128420 I 0.882
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.881
GLYMA13G31660 Glycine max GLYMA13G31660 I 0.879
Pm025312 Prunus mume Pm025312 I 0.876
MDP0000173636 Malus domestica MDP0000173636 I 0.876
PRUPE_ppa007445mg Prunus persica PRUPE_ppa007445mg I 0.876
MDP0000180683 Malus domestica MDP0000180683 I 0.876
PK08629.1 Cannabis sativa PK08629.1 I 0.873
POPTR_0011s04650 Populus trichocarpa POPTR_0011s04650 I 0.872
GLYMA06G38440 Glycine max GLYMA06G38440 I 0.872
Bo1g048300 Brassica oleracea Bo1g048300 I 0.871
Bra026353 Brassica rapa Bra026353 I 0.871