CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10003848.g
(
Linum usitatissimum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Lus10003848.g
T298205_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.958
0.684
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.958
0.684
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.958
0.684
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.958
0.671
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10003848
NAC/NAM
15
99
PAGFRFHPTDDELVTHYLCRKYSDQKPAAPIIAELDLYKFDPWELPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGFWLSLLSS
Links
Other
NAC/NAM
family TFs
Other
Linum usitatissimum
TFs
157 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.969
SapurV1A.2021s0010
Salix purpurea
SapurV1A.2021s0010
I
0.969
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
0.969
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.968
SapurV1A.0039s0530
Salix purpurea
SapurV1A.0039s0530
I
0.968
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
0.967
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
0.967
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.963
MLOC_59162
Hordeum vulgare
MLOC_59162
I
0.963
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.961
PK26157.1
Cannabis sativa
PK26157.1
I
0.961
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.960
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.960
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.960
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.960
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.959
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.958
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.958
OB01G48340
Oryza brachyantha
OB01G48340
I
0.958
OBART01G39590
Oryza barthii
OBART01G39590
I
0.958
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.958
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.958
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.958
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.958
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.958
NAC48
Oryza sativa
OS01G0884300
D
0.958
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.958
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.958
Si002413m.g
Setaria italica
Si002413m.g
I
0.958
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.958
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.958
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.958
TCM_035160
Theobroma cacao
TCM_035160
I
0.958
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.958
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.958
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.958
F775_28813
Aegilops tauschii
F775_28813
I
0.958
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.958
Bra033239
Brassica rapa
Bra033239
I
0.958
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.958
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.958
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.958
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.958
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.958
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.958
NAC002
Arabidopsis thaliana
AT1G01720
D
0.958
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.957
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
0.957
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
0.957
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
0.957
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.957
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.957
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
0.957
OB05G24820
Oryza brachyantha
OB05G24820
I
0.957
ORUFI05G18190
Oryza rufipogon
ORUFI05G18190
I
0.957
mgf013201m
Mimulus guttatus
mgf013201m
I
0.957
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.956
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.955
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.955
Pavir.Ea03621
Panicum virgatum
Pavir.Ea03621
I
0.954
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.953
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.951
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.948
Si030752m.g
Setaria italica
Si030752m.g
I
0.945
Pavir.Bb00806
Panicum virgatum
Pavir.Bb00806
I
0.945
mgf004020m
Mimulus guttatus
mgf004020m
I
0.945
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.943
Pavir.Ba03301
Panicum virgatum
Pavir.Ba03301
I
0.943
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.941
LPERR11G01300
Leersia perrieri
LPERR11G01300
I
0.940
LPERR12G01440
Leersia perrieri
LPERR12G01440
I
0.938
Pavir.J04049
Panicum virgatum
Pavir.J04049
I
0.937
mgf002183m
Mimulus guttatus
mgf002183m
I
0.936
ORUFI05G17750
Oryza rufipogon
ORUFI05G17750
I
0.936
OS05G0415400
Oryza sativa
OS05G0415400
I
0.936
OPUNC05G14600
Oryza punctata
OPUNC05G14600
I
0.936
ONIVA05G17220
Oryza nivara
ONIVA05G17220
I
0.936
OBART05G16540
Oryza barthii
OBART05G16540
I
0.936
BGIOSGA018048
Oryza indica
BGIOSGA018048
I
0.936
ORGLA05G0143100
Oryza glaberrima
ORGLA05G0143100
I
0.936
OGLUM05G17550
Oryza glumaepatula
OGLUM05G17550
I
0.936
GSMUA_Achr7G23250_001
Musa acuminata
GSMUA_Achr7G23250_001
I
0.935
Sb02g006680
Sorghum bicolor
Sb02g006680
I
0.928
GRMZM2G162739
Zea mays
GRMZM2G162739
I
0.928
GRMZM2G079632
Zea mays
GRMZM2G079632
I
0.928
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.927
AMTR_s00017p00255350
Amborella trichopoda
AMTR_s00017p00255350
I
0.926
SELMODRAFT_71307
Selaginella moellendorffii
SELMODRAFT_71307
I
0.926
SELMODRAFT_86855
Selaginella moellendorffii
SELMODRAFT_86855
I
0.926
OMERI05G14410
Oryza meridionalis
OMERI05G14410
I
0.924
BRADI1G32660
Brachypodium distachyon
BRADI1G32660
I
0.914
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.912
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.911
LPERR05G13140
Leersia perrieri
LPERR05G13140
I
0.909
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.906
BRADI2G03467
Brachypodium distachyon
BRADI2G03467
I
0.904
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.904
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.904
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.903
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.903
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.903
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.903
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.903
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.903
Si032702m.g
Setaria italica
Si032702m.g
I
0.903
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.902
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.902
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.902
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.902
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.902
OB09G25590
Oryza brachyantha
OB09G25590
I
0.902
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.901
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.901
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.901
F775_13961
Aegilops tauschii
F775_13961
I
0.901
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.901
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.901
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.898
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.895
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.895
cassava39074.m1
Manihot esculenta
cassava39074.m1
I
0.891
MTR_2g068920
Medicago truncatula
MTR_2g068920
I
0.890
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
0.890
MTR_2g068880
Medicago truncatula
MTR_2g068880
I
0.888
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.887
Si036303m.g
Setaria italica
Si036303m.g
I
0.887
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.887
MLOC_25708
Hordeum vulgare
MLOC_25708
N
0.885
Gorai.006G088400
Gossypium raimondii
Gorai.006G088400
I
0.884
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.884
OS08G0511200
Oryza sativa
OS08G0511200
I
0.884
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
0.884
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.884
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.884
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
0.884
Ca_13571
Cicer arietinum
Ca_13571
I
0.883
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.883
Cla023594
Citrullus lanatus
Cla023594
I
0.882
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.881
Si022714m.g
Setaria italica
Si022714m.g
I
0.881
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
0.881
MLOC_13932
Hordeum vulgare
MLOC_13932
I
0.881
POPTR_0004s04920
Populus trichocarpa
POPTR_0004s04920
I
0.880
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.879
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
0.879
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.879
gw1.6.394.1
Physcomitrella patens
gw1.6.394.1
I
0.879
F775_20638
Aegilops tauschii
F775_20638
I
0.879
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.879
fgenesh1_pg.scaffold_182000024
Physcomitrella patens
fgenesh1_pg.scaffold_182000024
I
0.878
VIT_19s0027g00910
Vitis vinifera
VIT_19s0027g00910
I
0.877
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.876
PGSC0003DMG400039898
Solanum tuberosum
PGSC0003DMG400039898
I
0.876
VIT_19s0027g00840
Vitis vinifera
VIT_19s0027g00840
I
0.875
gw1.1.690.1
Physcomitrella patens
gw1.1.690.1
I
0.874
SapurV1A.0586s0170
Salix purpurea
SapurV1A.0586s0170
I
0.873
Gorai.010G236700
Gossypium raimondii
Gorai.010G236700
I
0.872