Lus10009029.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10009029.g T298230_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac058
M00886_2.00
Arabidopsis thaliana
CGTTGTCT

AGACAACG
PBM
Franco-Zorrilla et al.(2014)
ANAC58
0.927 0.851
anac058
M07210_2.00
Arabidopsis thaliana
CKTGHNNNRCAMGYWA

TWRCKTGYNNNDCAMG
Dap-seq
OMalley et al.(2016)
ANAC058_col_a
0.927 0.851
anac058
M07211_2.00
Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA

TDDCKTGHNNNDCAMGHA
Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a
0.927 0.851
ANAC038
M07188_2.00
Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA

TWRCKTGHDNNDYAMGNH
Dap-seq
OMalley et al.(2016)
ANAC038_col_a
0.885 0.789
ANAC038
M07189_2.00
Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH

DDTDDCKTRHDNNWCAAGHAA
Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a
0.885 0.789
NAC098
M07239_2.00
Arabidopsis thaliana
CKTGTNNNDYAMGYHA

TDRCKTRHNNNACAMG
Dap-seq
OMalley et al.(2016)
CUC2_colamp_a
0.877 0.798
NAC098
M07240_2.00
Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG

CKTGWDNNDCAMGNWANNN
Dap-seq
OMalley et al.(2016)
CUC2_col
0.877 0.798
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10009029 NAC/NAM 6 132

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28226.m000851 Ricinus communis 28226.m000851 I 0.912
29974.m000235 Ricinus communis 29974.m000235 I 0.933
30138.m004055 Ricinus communis 30138.m004055 I 0.898
anac058 Arabidopsis lyrata Al_scaffold_0003_1942 I 0.927
CUC2 Arabidopsis lyrata Al_scaffold_0008_1815 I 0.877
AMTR_s00010p00266320 Amborella trichopoda AMTR_s00010p00266320 I 0.880
AMTR_s00025p00174590 Amborella trichopoda AMTR_s00025p00174590 I 0.932
AMTR_s00079p00099620 Amborella trichopoda AMTR_s00079p00099620 I 0.925
Aquca_018_00116 Aquilegia coerulea Aquca_018_00116 I 0.902
Aquca_026_00305 Aquilegia coerulea Aquca_026_00305 I 0.924
Aquca_033_00035 Aquilegia coerulea Aquca_033_00035 I 0.874
ANAC038 Arabidopsis thaliana AT2G24430 D 0.885
anac058 Arabidopsis thaliana AT3G18400 D 0.927
NAC098 Arabidopsis thaliana AT5G53950 D 0.877
BGIOSGA013151 Oryza indica BGIOSGA013151 I 0.925
BGIOSGA029508 Oryza indica BGIOSGA029508 I 0.877
Bo01320s020 Brassica oleracea Bo01320s020 I 0.939
Bo1g117610 Brassica oleracea Bo1g117610 I 0.921
Bo2g043280 Brassica oleracea Bo2g043280 I 0.884
Bo3g071500 Brassica oleracea Bo3g071500 I 0.939
Bo8g099810 Brassica oleracea Bo8g099810 I 0.885
Bo9g113820 Brassica oleracea Bo9g113820 I 0.882
Bostr.19424s0822 Boechera stricta Bostr.19424s0822 I 0.928
Bostr.26675s0262 Boechera stricta Bostr.26675s0262 I 0.933
Bostr.26833s0880 Boechera stricta Bostr.26833s0880 I 0.877
Bostr.27895s0039 Boechera stricta Bostr.27895s0039 I 0.885
Bra001705 Brassica rapa Bra001705 I 0.939
Bra003023 Brassica rapa Bra003023 I 0.919
Bra007855 Brassica rapa Bra007855 I 0.885
Bra022319 Brassica rapa Bra022319 I 0.939
Bra022685 Brassica rapa Bra022685 I 0.884
Bra032095 Brassica rapa Bra032095 I 0.885
Bra037585 Brassica rapa Bra037585 I 0.921
BRADI1G14467 Brachypodium distachyon BRADI1G14467 I 0.911
Cagra.1681s0009 Capsella grandiflora Cagra.1681s0009 I 0.935
Cagra.4091s0015 Capsella grandiflora Cagra.4091s0015 I 0.885
Cagra.4622s0005 Capsella grandiflora Cagra.4622s0005 I 0.877
Carubv10015990m.g Capsella rubella Carubv10015990m.g I 0.933
Carubv10025508m.g Capsella rubella Carubv10025508m.g I 0.885
Carubv10028330m.g Capsella rubella Carubv10028330m.g I 0.877
cassava17517.valid.m1 Manihot esculenta cassava17517.valid.m1 I 0.898
cassava18338.valid.m1 Manihot esculenta cassava18338.valid.m1 I 0.908
cassava2919.m1 Manihot esculenta cassava2919.m1 I 0.940
cassava46147.m1 Manihot esculenta cassava46147.m1 I 0.877
cassava9086.m1 Manihot esculenta cassava9086.m1 I 0.941
Ca_11021 Cicer arietinum Ca_11021 I 0.888
chr1.LjT35C22.60.nc Lotus japonicus chr1.LjT35C22.60.nc I 0.915
chr3.CM0282.730.nc Lotus japonicus chr3.CM0282.730.nc I 0.878
Ciclev10008885m.g Citrus clementina Ciclev10008885m.g I 0.908
Ciclev10020480m.g Citrus clementina Ciclev10020480m.g I 0.911
Ciclev10023578m.g Citrus clementina Ciclev10023578m.g I 0.940
Cla019391 Citrullus lanatus Cla019391 I 0.895
Cla022572 Citrullus lanatus Cla022572 I 0.901
Cucsa.161510 Cucumis sativus Cucsa.161510 I 0.901
Cucsa.197830 Cucumis sativus Cucsa.197830 I 0.895
Eucgr.B00529 Eucalyptus grandis Eucgr.B00529 I 0.874
Eucgr.B00724 Eucalyptus grandis Eucgr.B00724 I 0.927
Eucgr.C02105 Eucalyptus grandis Eucgr.C02105 I 0.908
Eucgr.K02225 Eucalyptus grandis Eucgr.K02225 I 0.927
evm.TU.supercontig_244.7 Carica papaya evm.TU.supercontig_244.7 I 0.912
evm.TU.supercontig_3.509 Carica papaya evm.TU.supercontig_3.509 I 0.935
F775_05949 Aegilops tauschii F775_05949 I 0.913
ANAC039 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4000352 I 0.885
gene00971-v1.0-hybrid Fragaria vesca gene00971-v1.0-hybrid I 0.873
gene08765-v1.0-hybrid Fragaria vesca gene08765-v1.0-hybrid I 0.910
gene26043-v1.0-hybrid Fragaria vesca gene26043-v1.0-hybrid I 0.915
GLYMA04G08320 Glycine max GLYMA04G08320 I 0.903
GLYMA06G08440 Glycine max GLYMA06G08440 I 0.904
GLYMA06G21020 Glycine max GLYMA06G21020 I 0.874
GLYMA14G20276 Glycine max GLYMA14G20276 I 0.909
Gorai.006G060900 Gossypium raimondii Gorai.006G060900 I 0.928
Gorai.007G323900 Gossypium raimondii Gorai.007G323900 I 0.885
Gorai.010G124100 Gossypium raimondii Gorai.010G124100 I 0.908
GRMZM2G386163 Zea mays GRMZM2G386163 I 0.881
GSMUA_Achr10G19900_001 Musa acuminata GSMUA_Achr10G19900_001 I 0.915
GSMUA_Achr7G19680_001 Musa acuminata GSMUA_Achr7G19680_001 I 0.906
GSMUA_Achr8G18420_001 Musa acuminata GSMUA_Achr8G18420_001 I 0.906
LPERR03G21900 Leersia perrieri LPERR03G21900 I 0.926
LPERR09G11330 Leersia perrieri LPERR09G11330 I 0.877
Lus10001648.g Linum usitatissimum Lus10001648.g I 0.911
Lus10009669.g Linum usitatissimum Lus10009669.g I 0.972
Lus10020165.g Linum usitatissimum Lus10020165.g I 0.905
Lus10021659.g Linum usitatissimum Lus10021659.g I 0.911
Lus10026966.g Linum usitatissimum Lus10026966.g I 0.907
Lus10027227.g Linum usitatissimum Lus10027227.g I 0.935
Lus10038937.g Linum usitatissimum Lus10038937.g I 0.928
MDP0000153949 Malus domestica MDP0000153949 I 0.934
MDP0000232008 Malus domestica MDP0000232008 I 0.897
MDP0000246482 Malus domestica MDP0000246482 I 0.934
MDP0000690168 Malus domestica MDP0000690168 I 0.898
MDP0000911724 Malus domestica MDP0000911724 I 0.878
mgf021065m Mimulus guttatus mgf021065m I 0.920
mgf021404m Mimulus guttatus mgf021404m I 0.879
mgf025158m Mimulus guttatus mgf025158m I 0.904
MLOC_68284 Hordeum vulgare MLOC_68284 I 0.912
MTR_3g109340 Medicago truncatula MTR_3g109340 I 0.917
MTR_4g108760 Medicago truncatula MTR_4g108760 I 0.903
OB03G34470 Oryza brachyantha OB03G34470 I 0.905
OBART03G26480 Oryza barthii OBART03G26480 I 0.925
OBART09G15220 Oryza barthii OBART09G15220 I 0.877
OGLUM03G27330 Oryza glumaepatula OGLUM03G27330 I 0.925
OGLUM09G15820 Oryza glumaepatula OGLUM09G15820 I 0.877
OLONG_009674 Oryza longistaminata OLONG_009674 I 0.877
OMERI03G23890 Oryza meridionalis OMERI03G23890 I 0.925
OMERI07G04410 Oryza meridionalis OMERI07G04410 I 0.877
ONIVA03G27500 Oryza nivara ONIVA03G27500 I 0.925
ONIVA09G15800 Oryza nivara ONIVA09G15800 I 0.877
OPUNC03G24220 Oryza punctata OPUNC03G24220 I 0.915
OPUNC09G13640 Oryza punctata OPUNC09G13640 I 0.877
orange1.1g017827m.g Citrus sinensis orange1.1g017827m.g I 0.911
orange1.1g037591m.g Citrus sinensis orange1.1g037591m.g I 0.908
ORGLA03G0246300 Oryza glaberrima ORGLA03G0246300 I 0.925
ORGLA09G0117400 Oryza glaberrima ORGLA09G0117400 I 0.877
ORUFI03G27440 Oryza rufipogon ORUFI03G27440 I 0.925
ORUFI09G16430 Oryza rufipogon ORUFI09G16430 I 0.877
OS03G0624600 Oryza sativa OS03G0624600 I 0.925
OS09G0497900 Oryza sativa OS09G0497900 I 0.877
Pavir.Ia01262 Panicum virgatum Pavir.Ia01262 I 0.917
Pavir.Ib03976 Panicum virgatum Pavir.Ib03976 I 0.919
Pavir.J02772 Panicum virgatum Pavir.J02772 I 0.877
PGSC0003DMG400005384 Solanum tuberosum PGSC0003DMG400005384 I 0.905
PGSC0003DMG400014845 Solanum tuberosum PGSC0003DMG400014845 I 0.889
PGSC0003DMG400019523 Solanum tuberosum PGSC0003DMG400019523 I 0.885
PGSC0003DMG400028779 Solanum tuberosum PGSC0003DMG400028779 I 0.908
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I 0.877
PGSC0003DMG400033047 Solanum tuberosum PGSC0003DMG400033047 I 0.894
PK02366.1 Cannabis sativa PK02366.1 I 0.901
PK13860.1 Cannabis sativa PK13860.1 I 0.885
Pm005091 Prunus mume Pm005091 I 0.898
Pm024887 Prunus mume Pm024887 I 0.879
POPTR_0006s29180 Populus trichocarpa POPTR_0006s29180 I 0.918
POPTR_0011s11600 Populus trichocarpa POPTR_0011s11600 I 0.877
POPTR_0012s01610 Populus trichocarpa POPTR_0012s01610 I 0.899
POPTR_0012s05280 Populus trichocarpa POPTR_0012s05280 I 0.944
POPTR_0015s02170 Populus trichocarpa POPTR_0015s02170 I 0.893
POPTR_0015s03700 Populus trichocarpa POPTR_0015s03700 I 0.939
POPTR_0018s03910 Populus trichocarpa POPTR_0018s03910 I 0.919
PRUPE_ppa007653mg Prunus persica PRUPE_ppa007653mg I 0.887
PRUPE_ppa025916mg Prunus persica PRUPE_ppa025916mg I 0.898
SapurV1A.0263s0310 Salix purpurea SapurV1A.0263s0310 I 0.921
SapurV1A.0346s0160 Salix purpurea SapurV1A.0346s0160 I 0.898
SapurV1A.0377s0130 Salix purpurea SapurV1A.0377s0130 I 0.899
SapurV1A.0719s0060 Salix purpurea SapurV1A.0719s0060 I 0.931
SapurV1A.1146s0010 Salix purpurea SapurV1A.1146s0010 I 0.937
SapurV1A.1285s0100 Salix purpurea SapurV1A.1285s0100 I 0.919
SapurV1A.1325s0010 Salix purpurea SapurV1A.1325s0010 I 0.877
SapurV1A.1363s0020 Salix purpurea SapurV1A.1363s0020 I 0.919
SapurV1A.1381s0050 Salix purpurea SapurV1A.1381s0050 I 0.946
SapurV1A.1381s0060 Salix purpurea SapurV1A.1381s0060 I 0.946
SapurV1A.2059s0010 Salix purpurea SapurV1A.2059s0010 I 0.877
Sb01g014310 Sorghum bicolor Sb01g014310 I 0.912
Sb02g028870 Sorghum bicolor Sb02g028870 I 0.877
SELMODRAFT_67245 Selaginella moellendorffii SELMODRAFT_67245 I 0.874
SELMODRAFT_71303 Selaginella moellendorffii SELMODRAFT_71303 I 0.874
Si030187m.g Setaria italica Si030187m.g I 0.877
Si036535m.g Setaria italica Si036535m.g I 0.917
Solyc03g115850.2 Solanum lycopersicum Solyc03g115850.2 I 0.881
Solyc06g069100.1 Solanum lycopersicum Solyc06g069100.1 I 0.893
Solyc06g069710.2 Solanum lycopersicum Solyc06g069710.2 I 0.894
Solyc07g062840.2 Solanum lycopersicum Solyc07g062840.2 I 0.878
Solyc08g006020.2 Solanum lycopersicum Solyc08g006020.2 I 0.886
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I 0.875
Solyc12g036480.1 Solanum lycopersicum Solyc12g036480.1 I 0.899
TCM_012350 Theobroma cacao TCM_012350 I 0.927
TCM_036791 Theobroma cacao TCM_036791 I 0.908
Thhalv10000520m.g Eutrema salsugineum Thhalv10000520m.g I 0.887
Thhalv10011708m.g Eutrema salsugineum Thhalv10011708m.g I 0.929
Thhalv10013863m.g Eutrema salsugineum Thhalv10013863m.g I 0.882
Thhalv10021200m.g Eutrema salsugineum Thhalv10021200m.g I 0.931
Traes_4AL_B44DF4ACC Triticum aestivum Traes_4AL_B44DF4ACC I 0.913
Traes_4BS_373BDBA94 Triticum aestivum Traes_4BS_373BDBA94 I 0.911
TRIUR3_27612 Triticum urartu TRIUR3_27612 I 0.913
ANAC039 Vitis vinifera VIT_04s0008g02710 I 0.906
anac058 Vitis vinifera VIT_17s0000g03660 I 0.925