Lus10009029.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10009029.g T298230_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac058
M00886_2.00
Arabidopsis thaliana
CGTTGTCT

AGACAACG
PBM
Franco-Zorrilla et al.(2014)
ANAC58
0.927 0.851
anac058
M07210_2.00
Arabidopsis thaliana
CKTGHNNNRCAMGYWA

TWRCKTGYNNNDCAMG
Dap-seq
OMalley et al.(2016)
ANAC058_col_a
0.927 0.851
anac058
M07211_2.00
Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA

TDDCKTGHNNNDCAMGHA
Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a
0.927 0.851
ANAC038
M07188_2.00
Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA

TWRCKTGHDNNDYAMGNH
Dap-seq
OMalley et al.(2016)
ANAC038_col_a
0.885 0.789
ANAC038
M07189_2.00
Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH

DDTDDCKTRHDNNWCAAGHAA
Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a
0.885 0.789
NAC098
M07239_2.00
Arabidopsis thaliana
CKTGTNNNDYAMGYHA

TDRCKTRHNNNACAMG
Dap-seq
OMalley et al.(2016)
CUC2_colamp_a
0.877 0.798
NAC098
M07240_2.00
Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG

CKTGWDNNDCAMGNWANNN
Dap-seq
OMalley et al.(2016)
CUC2_col
0.877 0.798
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10009029 NAC/NAM 6 132

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
C_00451 Schistosoma haematobium C_00451 N 0.000
D_00341 Schistosoma haematobium D_00341 N 0.000
ECPE_0000310601 Echinostoma caproni ECPE_0000310601 N 0.000
SCUD_0001799801 Schistosoma curassoni SCUD_0001799801 N 0.000
Sjc_0035440 Schistosoma japonicum Sjc_0035440 N 0.000
Smp_142120 Schistosoma mansoni Smp_142120 N 0.000
SMRZ_0002234401 Schistosoma margrebowiei SMRZ_0002234401 N 0.000
SMTD_0001577401 Schistosoma mattheei SMTD_0001577401 N 0.000
SPER_0000702801 Spirometra erinaceieuropaei SPER_0000702801 N 0.000
SROB_0000806101 Schistosoma rodhaini SROB_0000806101 N 0.000
SSLN_0000215501 Schistocephalus solidus SSLN_0000215501 N 0.000
T265_07555 Opisthorchis viverrini T265_07555 N 0.000
TRE_0001682801 Trichobilharzia regenti TRE_0001682801 N 0.000