Lus10011215.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10011215.g T298243_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD

HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.947 0.839
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA

TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.947 0.839
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY

RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.921 0.875
NAC047
M07198_2.00
Arabidopsis thaliana
CACGB

VCGTG
Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a
0.874 0.759
NAC047
M07199_2.00
Arabidopsis thaliana
WNNNWYACGYMWYYN

NRRWKRCGTRWNNNW
Dap-seq
OMalley et al.(2016)
ANAC047_col
0.874 0.759
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10011215 NAC/NAM 20 146

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI1G09177 Brachypodium distachyon BRADI1G09177 N 0.000
MLOC_74977 Hordeum vulgare MLOC_74977 N 0.000
LPERR03G28140 Leersia perrieri LPERR03G28140 N 0.000
GSMUA_Achr3G29320_001 Musa acuminata GSMUA_Achr3G29320_001 N 0.000
GSMUA_Achr4G11160_001 Musa acuminata GSMUA_Achr4G11160_001 N 0.000
OBART03G33610 Oryza barthii OBART03G33610 N 0.000
OB03G40700 Oryza brachyantha OB03G40700 N 0.000
ORGLA03G0304100 Oryza glaberrima ORGLA03G0304100 N 0.000
OGLUM03G33270 Oryza glumaepatula OGLUM03G33270 N 0.000
BGIOSGA013533 Oryza indica BGIOSGA013533 N 0.000
OLONG_003946 Oryza longistaminata OLONG_003946 N 0.000
OMERI03G31010 Oryza meridionalis OMERI03G31010 N 0.000
OPUNC03G30800 Oryza punctata OPUNC03G30800 N 0.000
ORUFI03G34980 Oryza rufipogon ORUFI03G34980 N 0.000
BHLH148 Oryza sativa OS03G0741100 N 0.000
Pavir.J38335 Panicum virgatum Pavir.J38335 N 0.000
Pavir.Ia00623 Panicum virgatum Pavir.Ia00623 N 0.000
PDK_20s1685261g001 Phoenix dactylifera PDK_20s1685261g001 N 0.000
Si036716m.g Setaria italica Si036716m.g N 0.000
Sb01g008570 Sorghum bicolor Sb01g008570 N 0.000
Traes_5DL_2A286B481 Triticum aestivum Traes_5DL_2A286B481 N 0.000
Traes_5BL_39FD9626E Triticum aestivum Traes_5BL_39FD9626E N 0.000