Lus10023537.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10023537.g T298288_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.912 0.807
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.912 0.807
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10023537 NAC/NAM 47 173

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10037939.g Linum usitatissimum Lus10037939.g I 0.948
Lus10038670.g Linum usitatissimum Lus10038670.g I 0.948
cassava22912.valid.m1 Manihot esculenta cassava22912.valid.m1 I 0.945
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I 0.942
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I 0.940
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I 0.939
TCM_043357 Theobroma cacao TCM_043357 I 0.936
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I 0.933
ANAC050 Arabidopsis thaliana AT3G10480 D 0.928
MDP0000437676 Malus domestica MDP0000437676 I 0.925
PK06477.1 Cannabis sativa PK06477.1 I 0.922
Ciclev10031606m.g Citrus clementina Ciclev10031606m.g I 0.921
orange1.1g014130m.g Citrus sinensis orange1.1g014130m.g I 0.921
MTR_1g090720 Medicago truncatula MTR_1g090720 I 0.919
Pm017547 Prunus mume Pm017547 I 0.919
Ca_08371 Cicer arietinum Ca_08371 I 0.918
GLYMA20G33430 Glycine max GLYMA20G33430 I 0.917
GLYMA10G34130 Glycine max GLYMA10G34130 I 0.917
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I 0.916
Thhalv10020717m.g Eutrema salsugineum Thhalv10020717m.g I 0.915
VIT_13s0019g05230 Vitis vinifera VIT_13s0019g05230 I 0.914
Carubv10013564m.g Capsella rubella Carubv10013564m.g I 0.913
Cagra.0834s0028 Capsella grandiflora Cagra.0834s0028 I 0.913
Thhalv10020745m.g Eutrema salsugineum Thhalv10020745m.g I 0.913
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I 0.912
Cla020838 Citrullus lanatus Cla020838 I 0.912
Carubv10013694m.g Capsella rubella Carubv10013694m.g I 0.912
MDP0000258167 Malus domestica MDP0000258167 I 0.912
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I 0.912
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I 0.912
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I 0.912
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I 0.912
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.910
Gorai.011G234200 Gossypium raimondii Gorai.011G234200 I 0.906
Eucgr.J01038 Eucalyptus grandis Eucgr.J01038 I 0.901
PGSC0003DMG401023373 Solanum tuberosum PGSC0003DMG401023373 I 0.887
Solyc05g055470.2 Solanum lycopersicum Solyc05g055470.2 I 0.885
Bra029844 Brassica rapa Bra029844 I 0.883
Bo5g137360 Brassica oleracea Bo5g137360 I 0.883
mgf004743m Mimulus guttatus mgf004743m I 0.883
ANAC052 Arabidopsis thaliana AT3G10490 I 0.882
Bra034119 Brassica rapa Bra034119 I 0.882
Bo1g143840 Brassica oleracea Bo1g143840 I 0.882
Solyc05g055480.2 Solanum lycopersicum Solyc05g055480.2 I 0.882
PGSC0003DMG402023373 Solanum tuberosum PGSC0003DMG402023373 I 0.881
gene23561-v1.0-hybrid Fragaria vesca gene23561-v1.0-hybrid I 0.880
mgf000623m Mimulus guttatus mgf000623m I 0.873
Solyc11g008010.1 Solanum lycopersicum Solyc11g008010.1 N 0.871