CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10029692.g
(
Linum usitatissimum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Lus10029692.g
T298310_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10029692
NAC/NAM
6
130
PPGFRFHPTDDELVKHYLCRKCASQPISVPIIAEIDLYKHDPWDLPGLALYGEKEWYFFSPRDRKYPNGEAARTGPALSDPQLVAIGRLPELTSLSDRRDQSQSRKRWCFTLGKLPKLDDWVLCR
Links
Other
NAC/NAM
family TFs
Other
Linum usitatissimum
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10042731.g
Linum usitatissimum
Lus10042731.g
I
0.948
Lus10025690.g
Linum usitatissimum
Lus10025690.g
I
0.927
Lus10018142.g
Linum usitatissimum
Lus10018142.g
I
0.925
evm.TU.supercontig_37.28
Carica papaya
evm.TU.supercontig_37.28
I
0.914
PGSC0003DMG400017567
Solanum tuberosum
PGSC0003DMG400017567
I
0.913
30193.m000709
Ricinus communis
30193.m000709
I
0.912
Gorai.012G037600
Gossypium raimondii
Gorai.012G037600
I
0.912
cassava5772.m1
Manihot esculenta
cassava5772.m1
I
0.911
Cucsa.125330
Cucumis sativus
Cucsa.125330
I
0.910
TCM_001595
Theobroma cacao
TCM_001595
I
0.909
Cla023536
Citrullus lanatus
Cla023536
I
0.908
Pm004758
Prunus mume
Pm004758
I
0.906
gene11226-v1.0-hybrid
Fragaria vesca
gene11226-v1.0-hybrid
I
0.906
Thhalv10008371m.g
Eutrema salsugineum
Thhalv10008371m.g
I
0.906
evm.TU.supercontig_64.115
Carica papaya
evm.TU.supercontig_64.115
I
0.906
PRUPE_ppa009380mg
Prunus persica
PRUPE_ppa009380mg
I
0.906
Eucgr.I00060
Eucalyptus grandis
Eucgr.I00060
I
0.905
29648.m002012
Ricinus communis
29648.m002012
I
0.903
GLYMA02G26480
Glycine max
GLYMA02G26480
I
0.902
POPTR_0002s08150
Populus trichocarpa
POPTR_0002s08150
I
0.901
POPTR_0005s20240
Populus trichocarpa
POPTR_0005s20240
I
0.901
chr4.LjT06B21.210.nd
Lotus japonicus
chr4.LjT06B21.210.nd
I
0.899
VIT_07s0031g02610
Vitis vinifera
VIT_07s0031g02610
I
0.899
Eucgr.H05089
Eucalyptus grandis
Eucgr.H05089
I
0.897
PGSC0003DMG400009245
Solanum tuberosum
PGSC0003DMG400009245
I
0.895
Solyc06g060230.2
Solanum lycopersicum
Solyc06g060230.2
I
0.893
Ciclev10001976m.g
Citrus clementina
Ciclev10001976m.g
I
0.892
Eucgr.I00101
Eucalyptus grandis
Eucgr.I00101
I
0.892
Eucgr.F04341
Eucalyptus grandis
Eucgr.F04341
I
0.891
Lus10020883.g
Linum usitatissimum
Lus10020883.g
I
0.890
Lus10033493.g
Linum usitatissimum
Lus10033493.g
I
0.890
AMTR_s00009p00259320
Amborella trichopoda
AMTR_s00009p00259320
I
0.885
Eucgr.I00059
Eucalyptus grandis
Eucgr.I00059
I
0.882
PK25206.1
Cannabis sativa
PK25206.1
I
0.882
Eucgr.I00100
Eucalyptus grandis
Eucgr.I00100
I
0.882
GLYMA06G11970
Glycine max
GLYMA06G11970
I
0.881
Bo2g092550
Brassica oleracea
Bo2g092550
I
0.881
Bra008309
Brassica rapa
Bra008309
I
0.881
Thhalv10018998m.g
Eutrema salsugineum
Thhalv10018998m.g
I
0.880
NAC032
Arabidopsis thaliana
AT1G77450
I
0.879
Cagra.0096s0087
Capsella grandiflora
Cagra.0096s0087
I
0.879
Carubv10020834m.g
Capsella rubella
Carubv10020834m.g
I
0.879
anac032
Arabidopsis lyrata
scaffold_202708.1
I
0.879
Pm012630
Prunus mume
Pm012630
I
0.878
MTR_3g088110
Medicago truncatula
MTR_3g088110
I
0.878
Ca_16946
Cicer arietinum
Ca_16946
I
0.877
PRUPE_ppa009438mg
Prunus persica
PRUPE_ppa009438mg
I
0.877
Cla014135
Citrullus lanatus
Cla014135
I
0.877
Cucsa.060600
Cucumis sativus
Cucsa.060600
I
0.877
LjT04N09.140.nd
Lotus japonicus
LjT04N09.140.nd
I
0.875
PGSC0003DMG400032555
Solanum tuberosum
PGSC0003DMG400032555
I
0.875
Bostr.20129s0180
Boechera stricta
Bostr.20129s0180
I
0.875
Ca_12660
Cicer arietinum
Ca_12660
I
0.874
gene24179-v1.0-hybrid
Fragaria vesca
gene24179-v1.0-hybrid
I
0.872