Lus10038937.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10038937.g T298363_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac058
M00886_2.00
Arabidopsis thaliana
CGTTGTCT

AGACAACG
PBM
Franco-Zorrilla et al.(2014)
ANAC58
0.926 0.789
anac058
M07210_2.00
Arabidopsis thaliana
CKTGHNNNRCAMGYWA

TWRCKTGYNNNDCAMG
Dap-seq
OMalley et al.(2016)
ANAC058_col_a
0.926 0.789
anac058
M07211_2.00
Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA

TDDCKTGHNNNDCAMGHA
Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a
0.926 0.789
ANAC038
M07188_2.00
Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA

TWRCKTGHDNNDYAMGNH
Dap-seq
OMalley et al.(2016)
ANAC038_col_a
0.879 0.711
ANAC038
M07189_2.00
Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH

DDTDDCKTRHDNNWCAAGHAA
Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a
0.879 0.711
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10038937 NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Lus10027227.g Linum usitatissimum Lus10027227.g I 0.969
MDP0000153949 Malus domestica MDP0000153949 I 0.939
evm.TU.supercontig_3.509 Carica papaya evm.TU.supercontig_3.509 I 0.939
MDP0000246482 Malus domestica MDP0000246482 I 0.939
Aquca_026_00305 Aquilegia coerulea Aquca_026_00305 I 0.938
POPTR_0012s05280 Populus trichocarpa POPTR_0012s05280 I 0.937
SapurV1A.1381s0050 Salix purpurea SapurV1A.1381s0050 I 0.937
SapurV1A.1381s0060 Salix purpurea SapurV1A.1381s0060 I 0.937
Gorai.006G060900 Gossypium raimondii Gorai.006G060900 I 0.937
cassava9086.m1 Manihot esculenta cassava9086.m1 I 0.937
Ciclev10023578m.g Citrus clementina Ciclev10023578m.g I 0.937
SapurV1A.1146s0010 Salix purpurea SapurV1A.1146s0010 I 0.936
TCM_012350 Theobroma cacao TCM_012350 I 0.936
POPTR_0015s03700 Populus trichocarpa POPTR_0015s03700 I 0.935
AMTR_s00079p00099620 Amborella trichopoda AMTR_s00079p00099620 I 0.933
Bra001705 Brassica rapa Bra001705 I 0.931
Bra022319 Brassica rapa Bra022319 I 0.931
Bo01320s020 Brassica oleracea Bo01320s020 I 0.931
OPUNC03G24220 Oryza punctata OPUNC03G24220 I 0.931
Eucgr.K02225 Eucalyptus grandis Eucgr.K02225 I 0.931
Bo3g071500 Brassica oleracea Bo3g071500 I 0.931
Bostr.26675s0262 Boechera stricta Bostr.26675s0262 I 0.930
SapurV1A.0719s0060 Salix purpurea SapurV1A.0719s0060 I 0.929
Cagra.1681s0009 Capsella grandiflora Cagra.1681s0009 I 0.929
Pavir.Ib03976 Panicum virgatum Pavir.Ib03976 I 0.929
cassava2919.m1 Manihot esculenta cassava2919.m1 I 0.928
29974.m000235 Ricinus communis 29974.m000235 I 0.928
Lus10009669.g Linum usitatissimum Lus10009669.g I 0.928
Thhalv10021200m.g Eutrema salsugineum Thhalv10021200m.g I 0.928
Pavir.Ia01262 Panicum virgatum Pavir.Ia01262 I 0.928
Lus10009029.g Linum usitatissimum Lus10009029.g I 0.928
Eucgr.B00724 Eucalyptus grandis Eucgr.B00724 I 0.927
anac058 Arabidopsis lyrata Al_scaffold_0003_1942 I 0.926
anac058 Arabidopsis thaliana AT3G18400 D 0.926
SapurV1A.1363s0020 Salix purpurea SapurV1A.1363s0020 I 0.925
POPTR_0018s03910 Populus trichocarpa POPTR_0018s03910 I 0.925
Thhalv10011708m.g Eutrema salsugineum Thhalv10011708m.g I 0.925
SapurV1A.1285s0100 Salix purpurea SapurV1A.1285s0100 I 0.925
mgf021065m Mimulus guttatus mgf021065m I 0.924
Bostr.19424s0822 Boechera stricta Bostr.19424s0822 I 0.924
LPERR03G21900 Leersia perrieri LPERR03G21900 I 0.923
Sb01g014310 Sorghum bicolor Sb01g014310 I 0.923
Solyc12g036480.1 Solanum lycopersicum Solyc12g036480.1 I 0.923
anac058 Vitis vinifera VIT_17s0000g03660 I 0.923
Carubv10015990m.g Capsella rubella Carubv10015990m.g I 0.922
POPTR_0006s29180 Populus trichocarpa POPTR_0006s29180 I 0.922
OMERI03G23890 Oryza meridionalis OMERI03G23890 I 0.921
OBART03G26480 Oryza barthii OBART03G26480 I 0.921
OGLUM03G27330 Oryza glumaepatula OGLUM03G27330 I 0.921
ONIVA03G27500 Oryza nivara ONIVA03G27500 I 0.921
OS03G0624600 Oryza sativa OS03G0624600 I 0.921
PGSC0003DMG400005384 Solanum tuberosum PGSC0003DMG400005384 I 0.921
ORUFI03G27440 Oryza rufipogon ORUFI03G27440 I 0.921
BGIOSGA013151 Oryza indica BGIOSGA013151 I 0.921
ORGLA03G0246300 Oryza glaberrima ORGLA03G0246300 I 0.921
28226.m000851 Ricinus communis 28226.m000851 I 0.920
evm.TU.supercontig_244.7 Carica papaya evm.TU.supercontig_244.7 I 0.920
SapurV1A.0263s0310 Salix purpurea SapurV1A.0263s0310 I 0.919
Bra037585 Brassica rapa Bra037585 I 0.918
Bo1g117610 Brassica oleracea Bo1g117610 I 0.918
OB03G34470 Oryza brachyantha OB03G34470 I 0.918
Si036535m.g Setaria italica Si036535m.g I 0.918
MTR_3g109340 Medicago truncatula MTR_3g109340 I 0.917
Gorai.010G124100 Gossypium raimondii Gorai.010G124100 I 0.916
cassava18338.valid.m1 Manihot esculenta cassava18338.valid.m1 I 0.916
orange1.1g037591m.g Citrus sinensis orange1.1g037591m.g I 0.916
Ciclev10008885m.g Citrus clementina Ciclev10008885m.g I 0.916
PGSC0003DMG400028779 Solanum tuberosum PGSC0003DMG400028779 I 0.916
TCM_036791 Theobroma cacao TCM_036791 I 0.916
ANAC039 Vitis vinifera VIT_04s0008g02710 I 0.915
Eucgr.C02105 Eucalyptus grandis Eucgr.C02105 I 0.913
chr1.LjT35C22.60.nc Lotus japonicus chr1.LjT35C22.60.nc I 0.913
PK02366.1 Cannabis sativa PK02366.1 I 0.912
GSMUA_Achr10G19900_001 Musa acuminata GSMUA_Achr10G19900_001 I 0.912
Lus10020165.g Linum usitatissimum Lus10020165.g I 0.909
PRUPE_ppa025916mg Prunus persica PRUPE_ppa025916mg I 0.907
MDP0000690168 Malus domestica MDP0000690168 I 0.907
MDP0000232008 Malus domestica MDP0000232008 I 0.907
Pm005091 Prunus mume Pm005091 I 0.907
GLYMA06G08440 Glycine max GLYMA06G08440 I 0.906
mgf025158m Mimulus guttatus mgf025158m I 0.906
Lus10001648.g Linum usitatissimum Lus10001648.g I 0.905
GSMUA_Achr7G19680_001 Musa acuminata GSMUA_Achr7G19680_001 I 0.905
TRIUR3_27612 Triticum urartu TRIUR3_27612 I 0.905
Traes_4AL_B44DF4ACC Triticum aestivum Traes_4AL_B44DF4ACC I 0.905
MLOC_68284 Hordeum vulgare MLOC_68284 I 0.905
F775_05949 Aegilops tauschii F775_05949 I 0.905
GLYMA04G08320 Glycine max GLYMA04G08320 I 0.905
Lus10021659.g Linum usitatissimum Lus10021659.g I 0.905
Traes_4BS_373BDBA94 Triticum aestivum Traes_4BS_373BDBA94 I 0.904
Aquca_018_00116 Aquilegia coerulea Aquca_018_00116 I 0.904
BRADI1G14467 Brachypodium distachyon BRADI1G14467 I 0.904
Cla022572 Citrullus lanatus Cla022572 I 0.904
GSMUA_Achr8G18420_001 Musa acuminata GSMUA_Achr8G18420_001 I 0.904
Cucsa.161510 Cucumis sativus Cucsa.161510 I 0.904
Solyc06g069100.1 Solanum lycopersicum Solyc06g069100.1 I 0.903
gene26043-v1.0-hybrid Fragaria vesca gene26043-v1.0-hybrid I 0.902
Bra003023 Brassica rapa Bra003023 I 0.902
orange1.1g017827m.g Citrus sinensis orange1.1g017827m.g I 0.901
Ciclev10020480m.g Citrus clementina Ciclev10020480m.g I 0.901
Lus10026966.g Linum usitatissimum Lus10026966.g I 0.901
gene08765-v1.0-hybrid Fragaria vesca gene08765-v1.0-hybrid I 0.895
MTR_4g108760 Medicago truncatula MTR_4g108760 I 0.894
Cla019391 Citrullus lanatus Cla019391 I 0.894
Cucsa.197830 Cucumis sativus Cucsa.197830 I 0.893
SapurV1A.0346s0160 Salix purpurea SapurV1A.0346s0160 I 0.892
PGSC0003DMG400014845 Solanum tuberosum PGSC0003DMG400014845 I 0.890
POPTR_0012s01610 Populus trichocarpa POPTR_0012s01610 I 0.888
SapurV1A.0377s0130 Salix purpurea SapurV1A.0377s0130 I 0.888
POPTR_0015s02170 Populus trichocarpa POPTR_0015s02170 I 0.887
30138.m004055 Ricinus communis 30138.m004055 I 0.886
cassava17517.valid.m1 Manihot esculenta cassava17517.valid.m1 I 0.886
Ca_11021 Cicer arietinum Ca_11021 I 0.884
mgf021404m Mimulus guttatus mgf021404m I 0.881
GLYMA14G20276 Glycine max GLYMA14G20276 I 0.881
Thhalv10000520m.g Eutrema salsugineum Thhalv10000520m.g I 0.881
ANAC039 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4000352 I 0.879
Bra032095 Brassica rapa Bra032095 I 0.879
Carubv10025508m.g Capsella rubella Carubv10025508m.g I 0.879
Bo8g099810 Brassica oleracea Bo8g099810 I 0.879
Bostr.27895s0039 Boechera stricta Bostr.27895s0039 I 0.879
Cagra.4091s0015 Capsella grandiflora Cagra.4091s0015 I 0.879
ANAC038 Arabidopsis thaliana AT2G24430 D 0.879
Solyc08g006020.2 Solanum lycopersicum Solyc08g006020.2 I 0.879
Bra007855 Brassica rapa Bra007855 I 0.879
AMTR_s00025p00174590 Amborella trichopoda AMTR_s00025p00174590 I 0.876
Solyc06g069710.2 Solanum lycopersicum Solyc06g069710.2 I 0.875
PGSC0003DMG400033047 Solanum tuberosum PGSC0003DMG400033047 I 0.874
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I 0.874
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I 0.872