CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000214515
(
Malus domestica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
MDP0000214515
T298446_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.922
0.470
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.871
0.409
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.871
0.409
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.871
0.409
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000214515
NAC/NAM
19
146
QVGYRFHPTKEELISHYLKLKLRGMDSLVSDAIREINICNYEPWELPEISLIKSDDEWYFYNRPIYKKNSRNEVERATATGFWKSTGKEKIVKDRDNKIIGKKRILTFRQGRGRNAPITNWVMHEFSI
Links
Other
NAC/NAM
family TFs
Other
Malus domestica
TFs
101 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000575835
Malus domestica
MDP0000575835
I
0.989
MDP0000311190
Malus domestica
MDP0000311190
I
0.988
MDP0000231843
Malus domestica
MDP0000231843
I
0.964
POPTR_0014s10330
Populus trichocarpa
POPTR_0014s10330
I
0.949
POPTR_0014s10360
Populus trichocarpa
POPTR_0014s10360
I
0.946
POPTR_0014s10350
Populus trichocarpa
POPTR_0014s10350
I
0.946
SapurV1A.0321s0350
Salix purpurea
SapurV1A.0321s0350
I
0.936
MDP0000282616
Malus domestica
MDP0000282616
I
0.935
POPTR_0014s07210
Populus trichocarpa
POPTR_0014s07210
I
0.931
SapurV1A.0321s0340
Salix purpurea
SapurV1A.0321s0340
I
0.931
SapurV1A.0321s0360
Salix purpurea
SapurV1A.0321s0360
I
0.931
Bo9g004100
Brassica oleracea
Bo9g004100
I
0.924
Thhalv10028684m.g
Eutrema salsugineum
Thhalv10028684m.g
I
0.924
Bra036328
Brassica rapa
Bra036328
I
0.923
NAC69
Arabidopsis thaliana
AT4G01550
D
0.922
anac069
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002854
I
0.922
SapurV1A.0586s0170
Salix purpurea
SapurV1A.0586s0170
I
0.921
POPTR_0002s18290
Populus trichocarpa
POPTR_0002s18290
I
0.921
Bo6g119080
Brassica oleracea
Bo6g119080
I
0.920
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.920
Bo9g004090
Brassica oleracea
Bo9g004090
I
0.920
Carubv10003260m.g
Capsella rubella
Carubv10003260m.g
I
0.918
Bostr.4825s0023
Boechera stricta
Bostr.4825s0023
I
0.917
POPTR_0002s18310
Populus trichocarpa
POPTR_0002s18310
I
0.916
Bo9g004070
Brassica oleracea
Bo9g004070
I
0.913
SapurV1A.0003s0330
Salix purpurea
SapurV1A.0003s0330
I
0.912
SapurV1A.0162s0450
Salix purpurea
SapurV1A.0162s0450
I
0.909
MDP0000626215
Malus domestica
MDP0000626215
N
0.908
F775_13961
Aegilops tauschii
F775_13961
I
0.907
POPTR_0002s15560
Populus trichocarpa
POPTR_0002s15560
I
0.905
MDP0000274989
Malus domestica
MDP0000274989
N
0.904
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
0.903
Bra036327
Brassica rapa
Bra036327
I
0.903
Bra008553
Brassica rapa
Bra008553
I
0.901
ORUFI08G03870
Oryza rufipogon
ORUFI08G03870
I
0.898
BGIOSGA027623
Oryza indica
BGIOSGA027623
I
0.898
OS08G0157900
Oryza sativa
OS08G0157900
I
0.898
ONIVA08G03440
Oryza nivara
ONIVA08G03440
I
0.898
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.892
cassava39381.m1
Manihot esculenta
cassava39381.m1
N
0.891
Carubv10000489m.g
Capsella rubella
Carubv10000489m.g
I
0.889
Bo00853s060
Brassica oleracea
Bo00853s060
I
0.888
Pavir.Fb00405
Panicum virgatum
Pavir.Fb00405
I
0.887
gene18589-v1.0-hybrid
Fragaria vesca
gene18589-v1.0-hybrid
N
0.887
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.887
30076.m004475
Ricinus communis
30076.m004475
N
0.885
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.885
OLONG_000105
Oryza longistaminata
OLONG_000105
I
0.884
OBART08G03460
Oryza barthii
OBART08G03460
I
0.884
OB08G13730
Oryza brachyantha
OB08G13730
I
0.884
ORGLA08G0029000
Oryza glaberrima
ORGLA08G0029000
I
0.884
OGLUM08G03540
Oryza glumaepatula
OGLUM08G03540
I
0.884
OPUNC08G03310
Oryza punctata
OPUNC08G03310
I
0.884
OMERI08G03500
Oryza meridionalis
OMERI08G03500
I
0.884
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.883
PRUPE_ppa019780mg
Prunus persica
PRUPE_ppa019780mg
N
0.881
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.881
Pavir.Fa01901
Panicum virgatum
Pavir.Fa01901
I
0.880
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.880
GSMUA_Achr11G07800_001
Musa acuminata
GSMUA_Achr11G07800_001
N
0.879
PK26157.1
Cannabis sativa
PK26157.1
I
0.879
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.879
Si013369m.g
Setaria italica
Si013369m.g
I
0.879
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.879
LPERR08G03510
Leersia perrieri
LPERR08G03510
I
0.879
Bostr.5325s0019
Boechera stricta
Bostr.5325s0019
I
0.878
PRUPE_ppa022384mg
Prunus persica
PRUPE_ppa022384mg
I
0.878
Sb07g003900
Sorghum bicolor
Sb07g003900
I
0.878
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.877
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.877
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.877
TCM_035160
Theobroma cacao
TCM_035160
I
0.877
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.877
BRADI3G16480
Brachypodium distachyon
BRADI3G16480
I
0.877
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.876
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.876
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.876
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.876
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.876
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.876
Si032702m.g
Setaria italica
Si032702m.g
I
0.876
OB09G25590
Oryza brachyantha
OB09G25590
I
0.876
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.876
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.876
Thhalv10007665m.g
Eutrema salsugineum
Thhalv10007665m.g
I
0.876
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.875
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
0.873
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.872
Lus10030175.g
Linum usitatissimum
Lus10030175.g
N
0.872
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.872
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.872
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.872
Lus10005143.g
Linum usitatissimum
Lus10005143.g
N
0.872
ANAC001
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1000119
I
0.872
Bo9g004110
Brassica oleracea
Bo9g004110
I
0.871
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.871
NAC002
Arabidopsis thaliana
AT1G01720
D
0.871
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.871
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.871
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.871
Bra033239
Brassica rapa
Bra033239
I
0.871