CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000241063
(
Malus domestica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
MDP0000241063
T298471_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN
NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.889
0.984
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000241063
NAC/NAM
17
111
PPGFRFHPTEEELLHYYLRKKVAFERIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATTAGLCFNDSMLLTFDR
Links
Other
NAC/NAM
family TFs
Other
Malus domestica
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000762302
Malus domestica
MDP0000762302
D
0.889
PK22182.1
Cannabis sativa
PK22182.1
I
0.889
Pm024260
Prunus mume
Pm024260
I
0.889
MDP0000140229
Malus domestica
MDP0000140229
I
0.889
PRUPE_ppa006801mg
Prunus persica
PRUPE_ppa006801mg
I
0.889
gene01881-v1.0-hybrid
Fragaria vesca
gene01881-v1.0-hybrid
I
0.886
Gorai.004G129200
Gossypium raimondii
Gorai.004G129200
I
0.886
orange1.1g014260m.g
Citrus sinensis
orange1.1g014260m.g
I
0.886
SapurV1A.0131s0060
Salix purpurea
SapurV1A.0131s0060
I
0.886
cassava45846.m1
Manihot esculenta
cassava45846.m1
I
0.886
TCM_015621
Theobroma cacao
TCM_015621
I
0.886
POPTR_0011s15640
Populus trichocarpa
POPTR_0011s15640
I
0.886
30068.m002591
Ricinus communis
30068.m002591
I
0.886
cassava42638.valid.m1
Manihot esculenta
cassava42638.valid.m1
I
0.886
Ciclev10021141m.g
Citrus clementina
Ciclev10021141m.g
I
0.886
Eucgr.E01053
Eucalyptus grandis
Eucgr.E01053
I
0.886
evm.TU.supercontig_37.89
Carica papaya
evm.TU.supercontig_37.89
I
0.882
POPTR_0001s45250
Populus trichocarpa
POPTR_0001s45250
I
0.881
SapurV1A.2717s0010
Salix purpurea
SapurV1A.2717s0010
I
0.881
SapurV1A.0941s0070
Salix purpurea
SapurV1A.0941s0070
I
0.881
Gorai.003G077700
Gossypium raimondii
Gorai.003G077700
I
0.881
Gorai.008G259700
Gossypium raimondii
Gorai.008G259700
I
0.881