CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000520807
(
Malus domestica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
MDP0000520807
T298561_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK19314.1
M01291_2.00
Cannabis sativa
NNNNAMDNHW
WDNHKTNNNN
PBM
Lambert et al.(2019)
pTH11252
0.973
0.965
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH
DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.957
0.904
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA
TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.957
0.904
anac057
M07208_2.00
Arabidopsis thaliana
TNCKTGHNNNDCAMGYH
DRCKTGHNNNDCAMGNA
Dap-seq
OMalley et al.(2016)
ANAC057_col_a
0.944
0.763
anac057
M07209_2.00
Arabidopsis thaliana
WNCKTGHNNHDCAMGYHAYCD
HGRTDRCKTGHDNNDCAMGNW
Dap-seq
OMalley et al.(2016)
ANAC057_colamp_a
0.944
0.763
NAC045
M07194_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG
CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_col_a
0.942
0.798
NAC045
M07195_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG
CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_colamp_a
0.942
0.798
PK26618.1
M01292_2.00
Cannabis sativa
NNYAMGHHA
TDDCKTRNN
PBM
Lambert et al.(2019)
pTH11328
0.941
0.798
ANAC020
M07178_2.00
Arabidopsis thaliana
TTNCKTGHNNNDCAMGYHAHY
RDTDRCKTGHNNNDCAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC020_col_v31
0.933
0.807
anac096
M07237_2.00
Arabidopsis thaliana
CTTSHNNNNBAMGHAAYC
GRTTDCKTVNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC096_colamp_a
0.871
0.667
anac096
M07238_2.00
Arabidopsis thaliana
TTNCTTSWNNHNYAMG
CKTRNDNNWSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC096_col
0.871
0.667
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000520807
NAC/NAM
7
133
PPGFRFHPTDEELVAYYLKRKINGRKIELEVIPEVDLYKCEPWDLPGKSLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNSQTRAVGMKKTLVYYGGRAPHGSRTDWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Malus domestica
TFs
216 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000002052
Ailuropoda melanoleuca
ENSAMEG00000002052
I
0.000
ENSAPLG00000012134
Anas platyrhynchos
ENSAPLG00000012134
I
0.000
MECOM
Anolis carolinensis
ENSACAG00000015620
I
0.000
Afo_R003945
Aptenodytes forsteri
Afo_R003945
I
0.000
ENSP00000417899-D1
Bos grunniens
ENSP00000417899-D1
I
0.000
MECOM
Bos taurus
ENSBTAG00000005871
I
0.000
Brh_R009954
Buceros rhinoceros
Brh_R009954
I
0.000
MECOM
Callithrix jacchus
ENSCJAG00000002651
I
0.000
Aan_R014069
Calypte anna
Aan_R014069
I
0.000
MECOM
Canis familiaris
ENSCAFG00000014621
I
0.000
MECOM
Cavia porcellus
ENSCPOG00000013572
I
0.000
Cmyd_10009299
Chelonia mydas
Cmyd_10009299
I
0.000
ENSCSAG00000012539
Chlorocebus sabaeus
ENSCSAG00000012539
I
0.000
MECOM
Dasypus novemcinctus
ENSDNOG00000007746
I
0.000
MECOM
Felis catus
ENSFCAG00000012665
I
0.000
ENSFALG00000008636
Ficedula albicollis
ENSFALG00000008636
I
0.000
ENSGALG00000009437
Gallus gallus
ENSGALG00000009437
I
0.000
Gfo_R004540
Geospiza fortis
Gfo_R004540
I
0.000
MECOM
Gorilla gorilla
ENSGGOG00000013086
I
0.000
MECOM
Homo sapiens
ENSG00000085276
D
0.000
ENSLACG00000017233
Latimeria chalumnae
ENSLACG00000017233
I
0.000
ENSLOCG00000009557
Lepisosteus oculatus
ENSLOCG00000009557
I
0.000
MECOM
Loxodonta africana
ENSLAFG00000011479
I
0.000
ENSMMUP00000002995
Macaca fascicularis
ENSMMUP00000002995
I
0.000
MECOM
Macaca mulatta
ENSMMUG00000002242
I
0.000
MECOM
Meleagris gallopavo
ENSMGAG00000010302
I
0.000
MECOM
Monodelphis domestica
ENSMODG00000016133
I
0.000
ENSMPUG00000017083
Mustela putorius furo
ENSMPUG00000017083
I
0.000
Mecom
Mus musculus
ENSMUSG00000027684
D
0.000
Myotis_brandtii_MECOM_10024770
Myotis brandtii
Myotis_brandtii_MECOM_10024770
I
0.000
MECOM
Myotis lucifugus
ENSMLUG00000015749
I
0.000
ENSNLEG00000004964
Nomascus leucogenys
ENSNLEG00000004964
I
0.000
MECOM
Ornithorhynchus anatinus
ENSOANG00000007585
I
0.000
MECOM
Oryctolagus cuniculus
ENSOCUG00000010171
I
0.000
MECOM
Otolemur garnettii
ENSOGAG00000012812
I
0.000
ENSOARG00000000899
Ovis aries
ENSOARG00000000899
I
0.000
MECOM
Pan troglodytes
ENSPTRG00000015601
I
0.000
ENSPANG00000001637
Papio anubis
ENSPANG00000001637
I
0.000
ENSPSIG00000004908
Pelodiscus sinensis
ENSPSIG00000004908
I
0.000
ENSPFOG00000011975
Poecilia formosa
ENSPFOG00000011975
I
0.000
Pvit_19180
Pogona vitticeps
Pvit_19180
I
0.000
ENSPPYG00000014277
Pongo abelii
ENSPPYG00000014277
I
0.000
Mecom
Rattus norvegicus
ENSRNOG00000012645
I
0.000
ENSSHAG00000017530
Sarcophilus harrisii
ENSSHAG00000017530
I
0.000
ENSTGUG00000011015
Taeniopygia guttata
ENSTGUG00000011015
I
0.000
MECOM
Tursiops truncatus
ENSTTRG00000002158
I
0.000
Tal_R005471
Tyto alba
Tal_R005471
I
0.000
mecom.S
Xenopus laevis
XB-GENE-6448217
I
0.000
B7ZRU9
Xenopus laevis
B7ZRU9
I
0.000
B7ZRM8
Xenopus laevis
B7ZRM8
I
0.000
mecom.L
Xenopus laevis
XB-GENE-980198
I
0.000
ENSXMAG00000010745
Xiphophorus maculatus
ENSXMAG00000010745
I
0.000