MDP0000852271 (Malus domestica)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 MDP0000852271 T298617_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANAC13
M07170_2.00
Arabidopsis thaliana
TDNCTTGYYNNNCAAG

CTTGNNNRRCAAGNHA
Dap-seq
OMalley et al.(2016)
ANAC013_col_a
0.873 0.746
ANAC13
M07171_2.00
Arabidopsis thaliana
CTTGYBHNNCAAGNHAH

DTDNCTTGNNDVRCAAG
Dap-seq
OMalley et al.(2016)
ANAC013_colamp_a
0.873 0.746
ANAC13
M11077_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC013_Q2
0.873 0.746
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH

DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.871 0.667
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA

TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.871 0.667
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000852271 NAC/NAM 18 149

Links

Other NAC/NAM family TFs
Other Malus domestica TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
anac028 Arabidopsis lyrata Al_scaffold_0002_1137 I 0.871
anac028 Arabidopsis thaliana AT1G65910 D 0.871
ANAC13 Arabidopsis thaliana AT1G32870 D 0.873
ANAC13 Arabidopsis lyrata fgenesh2_kg.1__3425__AT1G32870.2 I 0.880
Aquca_017_00010 Aquilegia coerulea Aquca_017_00010 N 0.891
Bo2g052630 Brassica oleracea Bo2g052630 I 0.874
Bostr.26959s0323 Boechera stricta Bostr.26959s0323 I 0.874
Bostr.3359s0074 Boechera stricta Bostr.3359s0074 I 0.875
Bra039745 Brassica rapa Bra039745 I 0.874
Cagra.11446s0003 Capsella grandiflora Cagra.11446s0003 I 0.874
Cagra.1443s0015 Capsella grandiflora Cagra.1443s0015 I 0.874
Carubv10008817m.g Capsella rubella Carubv10008817m.g I 0.872
Carubv10021788m.g Capsella rubella Carubv10021788m.g I 0.874
cassava19069.valid.m1 Manihot esculenta cassava19069.valid.m1 I 0.901
cassava22173.valid.m1 Manihot esculenta cassava22173.valid.m1 I 0.919
Ca_04337 Cicer arietinum Ca_04337 N 0.946
Ciclev10000612m.g Citrus clementina Ciclev10000612m.g I 0.955
Cla013854 Citrullus lanatus Cla013854 I 0.913
Cla016588 Citrullus lanatus Cla016588 N 0.906
Cucsa.364130 Cucumis sativus Cucsa.364130 N 0.899
Eucgr.F02771 Eucalyptus grandis Eucgr.F02771 N 0.923
evm.TU.supercontig_26.135 Carica papaya evm.TU.supercontig_26.135 I 0.958
gene27539-v1.0-hybrid Fragaria vesca gene27539-v1.0-hybrid N 0.958
GLYMA10G36360 Glycine max GLYMA10G36360 N 0.949
GLYMA20G31210 Glycine max GLYMA20G31210 N 0.949
Gorai.005G076200 Gossypium raimondii Gorai.005G076200 I 0.926
Gorai.009G260000 Gossypium raimondii Gorai.009G260000 I 0.924
LjSGA_007769.1 Lotus japonicus LjSGA_007769.1 N 0.927
Lus10028713.g Linum usitatissimum Lus10028713.g I 0.940
MDP0000146969 Malus domestica MDP0000146969 I 0.946
MDP0000169485 Malus domestica MDP0000169485 I 0.946
mg018130m Mimulus guttatus mg018130m I 0.875
MTR_1g097300 Medicago truncatula MTR_1g097300 N 0.940
PGSC0003DMG400031149 Solanum tuberosum PGSC0003DMG400031149 I 0.881
Pm022358 Prunus mume Pm022358 N 0.962
POPTR_0002s06210 Populus trichocarpa POPTR_0002s06210 I 0.921
POPTR_0005s22180 Populus trichocarpa POPTR_0005s22180 I 0.919
PRUPE_ppa003410mg Prunus persica PRUPE_ppa003410mg N 0.962
SapurV1A.0134s0420 Salix purpurea SapurV1A.0134s0420 I 0.922
SapurV1A.0348s0040 Salix purpurea SapurV1A.0348s0040 I 0.912
Sb09g020880 Sorghum bicolor Sb09g020880 N 0.883
Solyc04g072220.2 Solanum lycopersicum Solyc04g072220.2 I 0.875
TCM_036587 Theobroma cacao TCM_036587 I 0.919
Thhalv10018275m.g Eutrema salsugineum Thhalv10018275m.g I 0.874
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I 0.938