CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g047949m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g047949m.g
T298736_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g047949m
NAC/NAM
4
132
LVGFRFYPTDEEIICLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTEWVMHEIAV
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g040419m.g
Citrus sinensis
orange1.1g040419m.g
N
0.991
orange1.1g021772m.g
Citrus sinensis
orange1.1g021772m.g
N
0.986
orange1.1g017142m.g
Citrus sinensis
orange1.1g017142m.g
N
0.982
orange1.1g016435m.g
Citrus sinensis
orange1.1g016435m.g
N
0.978
orange1.1g037709m.g
Citrus sinensis
orange1.1g037709m.g
N
0.945
ORUFI01G00320
Oryza rufipogon
ORUFI01G00320
I
0.872
ORGLA12G0187900
Oryza glaberrima
ORGLA12G0187900
I
0.872
ORUFI01G18470
Oryza rufipogon
ORUFI01G18470
I
0.872
OS01G0104500
Oryza sativa
OS01G0104500
I
0.872
ONIVA01G18370
Oryza nivara
ONIVA01G18370
I
0.872
OS01G0393100
Oryza sativa
OS01G0393100
I
0.872
ONIVA01G00280
Oryza nivara
ONIVA01G00280
I
0.872
OBART01G16620
Oryza barthii
OBART01G16620
I
0.872
OBART01G00360
Oryza barthii
OBART01G00360
I
0.872
BGIOSGA002597
Oryza indica
BGIOSGA002597
I
0.872
OGLUM01G00350
Oryza glumaepatula
OGLUM01G00350
I
0.872
OGLUM01G19440
Oryza glumaepatula
OGLUM01G19440
I
0.872
OMERI01G15230
Oryza meridionalis
OMERI01G15230
I
0.872
BGIOSGA001578
Oryza indica
BGIOSGA001578
I
0.872
OMERI01G15210
Oryza meridionalis
OMERI01G15210
I
0.872
OLONG_022415
Oryza longistaminata
OLONG_022415
I
0.872
LPERR01G00270
Leersia perrieri
LPERR01G00270
I
0.871