Pavir.Ab03009 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Ab03009 T298759_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANAC050
M07200_2.00
Arabidopsis thaliana
CTTGHNNYNCAAGNA

TNCTTGNRNNDCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a
0.885 0.702
ANAC050
M07201_2.00
Arabidopsis thaliana
CTTGNNNHRCAMGBHA

TDVCKTGYDNNNCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a
0.885 0.702
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab03009.1.p NAC/NAM 20 155

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

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68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action