TF Information

Pavir.Ba02955 *(Panicum virgatum)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02365 (NAM)	IPR003441	Pavir.Ba02955	T298771_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ANAC087 M07232_2.00	Arabidopsis thaliana	TDNCKTSHNNNDYACGYHANB	VNTDRCGTRHNNNDSAMGNHA	Dap-seq OMalley et al.(2016) ANAC087_colamp_a	0.907	0.728
ANAC087 M07233_2.00	Arabidopsis thaliana	TWNCKTGWNNNDCAMGYHA	TDRCKTGHNNNWCAMGNWA	Dap-seq OMalley et al.(2016) ANAC087_col_v3a	0.907	0.728
NAC59 M11080_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ANAC059_01	0.880	0.746
NAC92 M00979_2.00	Arabidopsis thaliana	NNDYACGBHA	TDVCGTRHNN	PBM Lindemose et al.(2014) ANAC092	0.873	0.763
NAC92 M00730_2.00	Arabidopsis thaliana	DYACGNHAN	NTDNCGTRH	PBM Chang et al.(2013) pTH7335	0.873	0.763
NAC92 M07234_2.00	Arabidopsis thaliana	TWNCKTGHNNHDCAMGYWAY	RTWRCKTGHDNNDCAMGNWA	Dap-seq OMalley et al.(2016) ANAC092_colamp_a	0.873	0.763
NAC92 M07235_2.00	Arabidopsis thaliana	WRCKTGTNNNDCAMG	CKTGHNNNACAMGYW	Dap-seq OMalley et al.(2016) ANAC092_col_v3a	0.873	0.763
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Pavir.Ba02955.1.p	NAC/NAM	24	154	PPGFRFHPRDEEIINFYLTPKVFRRGFTSIAIGEVDLNKTEPWELPGKAKMGENEWYFFYQKDRKYPTGMRANRATEAGYWKATGKDKEIYGVTGGVAPPVIIGMKKTLVFYKGRAPRGAKTNWVMHEFRL

Links
Other NAC/NAM family TFs
Other *Panicum virgatum* TFs

Invalid Input OrderBy

159 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action