Pavir.Db01277 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Db01277 T298812_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Db01277.1.p NAC/NAM 54 212
Pavir.Db01277.2.p NAC/NAM 54 212

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G115721 Zea mays GRMZM2G115721 N 0.998
Pavir.Da00789 Panicum virgatum Pavir.Da00789 N 0.997
Si006435m.g Setaria italica Si006435m.g N 0.997
Sb10g022130 Sorghum bicolor Sb10g022130 N 0.997
MLOC_72553 Hordeum vulgare MLOC_72553 N 0.996
Lus10012927.g Linum usitatissimum Lus10012927.g N 0.995
Lus10034999.g Linum usitatissimum Lus10034999.g N 0.995
mgf019352m Mimulus guttatus mgf019352m N 0.995
Bra002802 Brassica rapa Bra002802 N 0.992
Bo9g126190 Brassica oleracea Bo9g126190 N 0.992
Cla000384 Citrullus lanatus Cla000384 N 0.990
Cucsa.087480 Cucumis sativus Cucsa.087480 N 0.989
Traes_7DL_1913741A8 Triticum aestivum Traes_7DL_1913741A8 N 0.987
Traes_7AL_EFD897AFC Triticum aestivum Traes_7AL_EFD897AFC N 0.985
Sb03g031000 Sorghum bicolor Sb03g031000 N 0.932
GRMZM2G179049 Zea mays GRMZM2G179049 N 0.922
Pavir.J23083 Panicum virgatum Pavir.J23083 N 0.920
Pavir.J11699 Panicum virgatum Pavir.J11699 N 0.920
GRMZM2G054277 Zea mays GRMZM2G054277 N 0.916
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N 0.913
OB06G26080 Oryza brachyantha OB06G26080 N 0.907
Si030942m.g Setaria italica Si030942m.g N 0.907
LPERR09G12100 Leersia perrieri LPERR09G12100 N 0.905
OMERI09G11810 Oryza meridionalis OMERI09G11810 N 0.899
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N 0.898
ONIVA09G17010 Oryza nivara ONIVA09G17010 N 0.898
BGIOSGA031062 Oryza indica BGIOSGA031062 N 0.898
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N 0.898
OBART09G15890 Oryza barthii OBART09G15890 N 0.898
OS09G0509100 Oryza sativa OS09G0509100 N 0.897
ORUFI09G17170 Oryza rufipogon ORUFI09G17170 N 0.897
Pavir.J04931 Panicum virgatum Pavir.J04931 N 0.880
Si014408m.g Setaria italica Si014408m.g N 0.880
OPUNC09G14320 Oryza punctata OPUNC09G14320 N 0.871