CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Eb03851
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Eb03851
T298839_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Eb03851.1.p
NAC/NAM
23
153
LGGFDFDPTEDELVLHFLRPQLRGLPPRVAGAVLEADPCAAAPWELLARYGLREQGHFFAARARGRGRGSVRRAVAGAGAWMHSSTRAGRSVTDFGVVVRWSRVSFCFYAQGRGAGPGQRSTGWVMEEYEI
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb03g045610
Sorghum bicolor
Sb03g045610
N
0.997
Pavir.Ea04027
Panicum virgatum
Pavir.Ea04027
N
0.996
Si004307m.g
Setaria italica
Si004307m.g
N
0.996
LPERR01G38080
Leersia perrieri
LPERR01G38080
N
0.986
MLOC_81739
Hordeum vulgare
MLOC_81739
N
0.974
OB07G17130
Oryza brachyantha
OB07G17130
N
0.877