Pavir.Gb00488 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Gb00488 T298865_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Gb00488.1.p NAC/NAM 12 145
Pavir.Gb00488.2.p NAC/NAM 12 145

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ga00022 Panicum virgatum Pavir.Ga00022 I 0.997
Si010680m.g Setaria italica Si010680m.g I 0.996
GRMZM2G063522 Zea mays GRMZM2G063522 I 0.988
Pavir.J36955 Panicum virgatum Pavir.J36955 I 0.988
BRADI1G32660 Brachypodium distachyon BRADI1G32660 I 0.987
Pavir.Db00380 Panicum virgatum Pavir.Db00380 N 0.985
Si006975m.g Setaria italica Si006975m.g N 0.984
Sb07g005610 Sorghum bicolor Sb07g005610 I 0.981
GRMZM2G167018 Zea mays GRMZM2G167018 I 0.981
OLONG_010248 Oryza longistaminata OLONG_010248 N 0.981
TRIUR3_34020 Triticum urartu TRIUR3_34020 N 0.980
Traes_2AL_CA89051FD Triticum aestivum Traes_2AL_CA89051FD N 0.980
MLOC_25708 Hordeum vulgare MLOC_25708 N 0.978
Sb10g027100 Sorghum bicolor Sb10g027100 N 0.978
Traes_7DL_BDD45DB24 Triticum aestivum Traes_7DL_BDD45DB24 I 0.975
TRIUR3_29250 Triticum urartu TRIUR3_29250 I 0.975
OMERI04G21180 Oryza meridionalis OMERI04G21180 N 0.975
F775_30297 Aegilops tauschii F775_30297 I 0.975
MLOC_53744 Hordeum vulgare MLOC_53744 N 0.972
TRIUR3_03895 Triticum urartu TRIUR3_03895 N 0.971
F775_26920 Aegilops tauschii F775_26920 N 0.971
Traes_7AL_BE3253C8F Triticum aestivum Traes_7AL_BE3253C8F N 0.971
LPERR06G20430 Leersia perrieri LPERR06G20430 N 0.970
ORGLA04G0226100 Oryza glaberrima ORGLA04G0226100 N 0.969
cassava27052.m1 Manihot esculenta cassava27052.m1 I 0.964
OBART04G25950 Oryza barthii OBART04G25950 N 0.961
Sb06g028800 Sorghum bicolor Sb06g028800 N 0.936
Cla023574 Citrullus lanatus Cla023574 N 0.931
GLYMA08G18470 Glycine max GLYMA08G18470 N 0.928
ORUFI05G17750 Oryza rufipogon ORUFI05G17750 I 0.922
OGLUM05G17550 Oryza glumaepatula OGLUM05G17550 I 0.922
Si036303m.g Setaria italica Si036303m.g I 0.922
ONIVA05G17220 Oryza nivara ONIVA05G17220 I 0.922
ORGLA05G0143100 Oryza glaberrima ORGLA05G0143100 I 0.922
OPUNC05G14600 Oryza punctata OPUNC05G14600 I 0.922
OS05G0415400 Oryza sativa OS05G0415400 I 0.922
BGIOSGA018048 Oryza indica BGIOSGA018048 I 0.922
OBART05G16540 Oryza barthii OBART05G16540 I 0.922
mgf004020m Mimulus guttatus mgf004020m I 0.921
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.919
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I 0.918
OMERI05G14410 Oryza meridionalis OMERI05G14410 I 0.916
OGLUM04G25460 Oryza glumaepatula OGLUM04G25460 N 0.909
OPUNC06G22270 Oryza punctata OPUNC06G22270 N 0.909
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I 0.907
OB04G32440 Oryza brachyantha OB04G32440 N 0.907
ORGLA04G0270600 Oryza glaberrima ORGLA04G0270600 I 0.906
ORUFI04G32410 Oryza rufipogon ORUFI04G32410 I 0.906
OS04G0691300 Oryza sativa OS04G0691300 I 0.906
BGIOSGA014034 Oryza indica BGIOSGA014034 I 0.906
ONIVA04G29890 Oryza nivara ONIVA04G29890 I 0.906
OGLUM04G30580 Oryza glumaepatula OGLUM04G30580 I 0.906
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.906
ONIVA04G24570 Oryza nivara ONIVA04G24570 N 0.906
MTR_3g096400 Medicago truncatula MTR_3g096400 N 0.905
SapurV1A.2021s0010 Salix purpurea SapurV1A.2021s0010 I 0.904
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I 0.904
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.904
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I 0.904
Pavir.Fb00532 Panicum virgatum Pavir.Fb00532 N 0.901
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I 0.901
OS06G0675600 Oryza sativa OS06G0675600 N 0.901
ORGLA06G0205600 Oryza glaberrima ORGLA06G0205600 N 0.901
BGIOSGA023457 Oryza indica BGIOSGA023457 N 0.901
OMERI06G24740 Oryza meridionalis OMERI06G24740 N 0.901
ONIVA02G35380 Oryza nivara ONIVA02G35380 N 0.901
OGLUM06G25850 Oryza glumaepatula OGLUM06G25850 N 0.901
ORUFI06G26420 Oryza rufipogon ORUFI06G26420 N 0.901
OBART06G24550 Oryza barthii OBART06G24550 N 0.901
GLYMA05G32850 Glycine max GLYMA05G32850 I 0.898
MTR_1g008740 Medicago truncatula MTR_1g008740 I 0.897
MTR_8g094580 Medicago truncatula MTR_8g094580 I 0.896
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.896
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I 0.895
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.895
MLOC_65286 Hordeum vulgare MLOC_65286 I 0.895
SapurV1A.0039s0530 Salix purpurea SapurV1A.0039s0530 I 0.895
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.894
GSMUA_Achr9G10210_001 Musa acuminata GSMUA_Achr9G10210_001 N 0.892
VIT_06s0004g00020 Vitis vinifera VIT_06s0004g00020 I 0.890
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I 0.890
OS08G0511200 Oryza sativa OS08G0511200 I 0.890
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I 0.890
F775_20638 Aegilops tauschii F775_20638 I 0.890
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I 0.890
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I 0.890
OPUNC04G23070 Oryza punctata OPUNC04G23070 N 0.889
29650.m000275 Ricinus communis 29650.m000275 N 0.889
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.889
e_gw1.259.32.1 Physcomitrella patens e_gw1.259.32.1 I 0.888
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I 0.886
OPUNC08G18240 Oryza punctata OPUNC08G18240 I 0.886
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.885
MLOC_13932 Hordeum vulgare MLOC_13932 I 0.885
Si022924m.g Setaria italica Si022924m.g I 0.885
Pavir.Ca02208 Panicum virgatum Pavir.Ca02208 I 0.885
LPERR08G17020 Leersia perrieri LPERR08G17020 I 0.885
Pavir.Cb00769 Panicum virgatum Pavir.Cb00769 I 0.885
BGIOSGA026695 Oryza indica BGIOSGA026695 I 0.884
ONIVA08G22710 Oryza nivara ONIVA08G22710 I 0.884
Si014180m.g Setaria italica Si014180m.g N 0.884
GRMZM2G139700 Zea mays GRMZM2G139700 I 0.883
Pavir.Ba02443 Panicum virgatum Pavir.Ba02443 I 0.882
GRMZM2G162739 Zea mays GRMZM2G162739 I 0.880
Cla011742 Citrullus lanatus Cla011742 I 0.880
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.880
BRADI2G03467 Brachypodium distachyon BRADI2G03467 I 0.879
TCM_035160 Theobroma cacao TCM_035160 I 0.879
GRMZM2G083347 Zea mays GRMZM2G083347 I 0.879
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.879
Carubv10011081m.g Capsella rubella Carubv10011081m.g N 0.878
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.878
Sb02g006680 Sorghum bicolor Sb02g006680 I 0.878
GRMZM2G079632 Zea mays GRMZM2G079632 I 0.878
Cagra.6372s0006 Capsella grandiflora Cagra.6372s0006 N 0.878
LPERR05G13140 Leersia perrieri LPERR05G13140 I 0.877
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I 0.877
anac032 Vitis vinifera VIT_18s0001g02300 I 0.875
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.874
Pavir.Ba03301 Panicum virgatum Pavir.Ba03301 I 0.874
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I 0.873
Pavir.Bb00806 Panicum virgatum Pavir.Bb00806 I 0.872
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.872
LPERR07G06440 Leersia perrieri LPERR07G06440 I 0.872
Si030752m.g Setaria italica Si030752m.g I 0.872
mgf013201m Mimulus guttatus mgf013201m I 0.872
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I 0.871
Sb03g000330 Sorghum bicolor Sb03g000330 I 0.871
Si022714m.g Setaria italica Si022714m.g I 0.871
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.871