CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Gb00655
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Gb00655
T298866_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Gb00655.1.p
NAC/NAM
11
138
PPGFRFYPSDEELVCHYLYKKVTNERAAQGTLVEVDLHAREPWELPDAAKLTASEWYFFSFRDRKYATGSRTNRATKTGYWKATGKDREVRSPAAPRAVVGMRKTLVFYRGRAPNGVKSCWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
107 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G081930
Zea mays
GRMZM2G081930
N
0.967
Pavir.Ga01251
Panicum virgatum
Pavir.Ga01251
N
0.967
Si010799m.g
Setaria italica
Si010799m.g
N
0.966
ONIVA04G01950
Oryza nivara
ONIVA04G01950
N
0.964
OGLUM04G18750
Oryza glumaepatula
OGLUM04G18750
N
0.964
OBART04G18700
Oryza barthii
OBART04G18700
N
0.964
OPUNC04G16450
Oryza punctata
OPUNC04G16450
N
0.964
ORGLA04G0158100
Oryza glaberrima
ORGLA04G0158100
N
0.964
BGIOSGA016756
Oryza indica
BGIOSGA016756
N
0.964
OS04G0515900
Oryza sativa
OS04G0515900
N
0.964
ORUFI04G20200
Oryza rufipogon
ORUFI04G20200
N
0.964
OB04G25790
Oryza brachyantha
OB04G25790
N
0.964
Pavir.Aa01668
Panicum virgatum
Pavir.Aa01668
N
0.963
Sb04g026440
Sorghum bicolor
Sb04g026440
N
0.963
OLONG_011232
Oryza longistaminata
OLONG_011232
N
0.962
GRMZM2G062009
Zea mays
GRMZM2G062009
N
0.962
Si018001m.g
Setaria italica
Si018001m.g
N
0.961
Pavir.Ab02337
Panicum virgatum
Pavir.Ab02337
N
0.959
GRMZM2G043813
Zea mays
GRMZM2G043813
N
0.957
MLOC_12466
Hordeum vulgare
MLOC_12466
N
0.956
Traes_2BL_D718E27A9
Triticum aestivum
Traes_2BL_D718E27A9
N
0.956
TRIUR3_33179
Triticum urartu
TRIUR3_33179
N
0.956
BRADI5G15587
Brachypodium distachyon
BRADI5G15587
N
0.956
OBART02G24560
Oryza barthii
OBART02G24560
N
0.952
OB02G31950
Oryza brachyantha
OB02G31950
N
0.952
ONIVA02G26880
Oryza nivara
ONIVA02G26880
N
0.947
OGLUM02G24950
Oryza glumaepatula
OGLUM02G24950
N
0.947
OMERI02G24100
Oryza meridionalis
OMERI02G24100
N
0.947
ORUFI02G25930
Oryza rufipogon
ORUFI02G25930
N
0.946
Pavir.J11268
Panicum virgatum
Pavir.J11268
N
0.942
OLONG_000596
Oryza longistaminata
OLONG_000596
N
0.941
Si036835m.g
Setaria italica
Si036835m.g
N
0.936
PDK_20s1301681g003
Phoenix dactylifera
PDK_20s1301681g003
N
0.935
GSMUA_AchrUn_randomG02760_001
Musa acuminata
GSMUA_AchrUn_randomG02760_001
N
0.935
Pavir.Ib03261
Panicum virgatum
Pavir.Ib03261
N
0.934
GSMUA_Achr8G18980_001
Musa acuminata
GSMUA_Achr8G18980_001
N
0.934
LPERR02G20100
Leersia perrieri
LPERR02G20100
N
0.932
GSMUA_Achr11G00880_001
Musa acuminata
GSMUA_Achr11G00880_001
N
0.931
GLYMA03G32116
Glycine max
GLYMA03G32116
N
0.929
GSMUA_Achr5G18670_001
Musa acuminata
GSMUA_Achr5G18670_001
N
0.927
GLYMA19G34881
Glycine max
GLYMA19G34881
N
0.921
mgf018312m
Mimulus guttatus
mgf018312m
N
0.920
GLYMA10G04350
Glycine max
GLYMA10G04350
N
0.918
GLYMA13G18620
Glycine max
GLYMA13G18620
N
0.918
PK19051.1
Cannabis sativa
PK19051.1
N
0.918
Gorai.007G147300
Gossypium raimondii
Gorai.007G147300
N
0.917
GSMUA_Achr1G20530_001
Musa acuminata
GSMUA_Achr1G20530_001
N
0.913
GSMUA_Achr1G10860_001
Musa acuminata
GSMUA_Achr1G10860_001
N
0.912
gene08112-v1.0-hybrid
Fragaria vesca
gene08112-v1.0-hybrid
N
0.908
Aquca_017_00744
Aquilegia coerulea
Aquca_017_00744
N
0.908
Ciclev10021312m.g
Citrus clementina
Ciclev10021312m.g
N
0.908
Gorai.001G254300
Gossypium raimondii
Gorai.001G254300
N
0.907
TCM_003998
Theobroma cacao
TCM_003998
N
0.907
SapurV1A.0006s0680
Salix purpurea
SapurV1A.0006s0680
N
0.906
cassava41082.m1
Manihot esculenta
cassava41082.m1
N
0.906
Pm020580
Prunus mume
Pm020580
N
0.902
Solyc09g025310.2
Solanum lycopersicum
Solyc09g025310.2
N
0.902
Solyc06g008360.2
Solanum lycopersicum
Solyc06g008360.2
N
0.902
PRUPE_ppa009628mg
Prunus persica
PRUPE_ppa009628mg
N
0.902
MDP0000697030
Malus domestica
MDP0000697030
N
0.902
PGSC0003DMG400025505
Solanum tuberosum
PGSC0003DMG400025505
N
0.901
PDK_20s1648061g001
Phoenix dactylifera
PDK_20s1648061g001
N
0.901
TRIUR3_32754
Triticum urartu
TRIUR3_32754
N
0.901
Traes_6AL_B92597EA9
Triticum aestivum
Traes_6AL_B92597EA9
N
0.901
Gorai.001G178800
Gossypium raimondii
Gorai.001G178800
N
0.900
BGIOSGA007201
Oryza indica
BGIOSGA007201
N
0.900
Ca_07743
Cicer arietinum
Ca_07743
N
0.900
MTR_7g097090
Medicago truncatula
MTR_7g097090
N
0.900
MTR_1g069805
Medicago truncatula
MTR_1g069805
N
0.900
F775_08585
Aegilops tauschii
F775_08585
N
0.899
MLOC_5165
Hordeum vulgare
MLOC_5165
N
0.899
Traes_6DL_8A1342D56
Triticum aestivum
Traes_6DL_8A1342D56
N
0.899
Pavir.Aa00144
Panicum virgatum
Pavir.Aa00144
I
0.898
Pavir.J34679
Panicum virgatum
Pavir.J34679
I
0.898
PGSC0003DMG400010294
Solanum tuberosum
PGSC0003DMG400010294
N
0.898
Traes_6BL_D00F04562
Triticum aestivum
Traes_6BL_D00F04562
I
0.896
F775_17109
Aegilops tauschii
F775_17109
N
0.896
Traes_6DL_1ABE78799
Triticum aestivum
Traes_6DL_1ABE78799
N
0.896
Traes_6BL_99F790D57
Triticum aestivum
Traes_6BL_99F790D57
N
0.896
SapurV1A.0233s0110
Salix purpurea
SapurV1A.0233s0110
N
0.895
Si017967m.g
Setaria italica
Si017967m.g
I
0.895
Sb04g036640
Sorghum bicolor
Sb04g036640
I
0.894
GSMUA_Achr11G22760_001
Musa acuminata
GSMUA_Achr11G22760_001
N
0.893
GRMZM2G140901
Zea mays
GRMZM2G140901
I
0.890
Eucgr.K03256
Eucalyptus grandis
Eucgr.K03256
N
0.890
ORUFI02G38340
Oryza rufipogon
ORUFI02G38340
N
0.888
OGLUM02G38020
Oryza glumaepatula
OGLUM02G38020
I
0.888
ONIVA02G39640
Oryza nivara
ONIVA02G39640
N
0.888
OBART02G36830
Oryza barthii
OBART02G36830
N
0.888
OB02G43380
Oryza brachyantha
OB02G43380
N
0.888
BGIOSGA009257
Oryza indica
BGIOSGA009257
N
0.888
OPUNC02G33860
Oryza punctata
OPUNC02G33860
N
0.888
OMERI02G34720
Oryza meridionalis
OMERI02G34720
N
0.888
OS02G0810900
Oryza sativa
OS02G0810900
N
0.888
ORGLA02G0320500
Oryza glaberrima
ORGLA02G0320500
N
0.888
TRIUR3_23299
Triticum urartu
TRIUR3_23299
N
0.887
Traes_6AL_B272C86BE
Triticum aestivum
Traes_6AL_B272C86BE
N
0.887
GRMZM5G857701
Zea mays
GRMZM5G857701
I
0.886
LPERR02G30240
Leersia perrieri
LPERR02G30240
I
0.885
Gorai.004G221300
Gossypium raimondii
Gorai.004G221300
N
0.884
OB0039G10090
Oryza brachyantha
OB0039G10090
N
0.878
GSMUA_Achr6G36550_001
Musa acuminata
GSMUA_Achr6G36550_001
N
0.877
Lus10033905.g
Linum usitatissimum
Lus10033905.g
N
0.877
Lus10022915.g
Linum usitatissimum
Lus10022915.g
N
0.877
BRADI3G54817
Brachypodium distachyon
BRADI3G54817
N
0.876
mgf009162m
Mimulus guttatus
mgf009162m
N
0.876
LPERR10G09740
Leersia perrieri
LPERR10G09740
N
0.872