CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Gb01092
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Gb01092
T298868_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Gb01092.1.p
NAC/NAM
20
169
PVGFRFKPTLRELVEFYLLPKLLDKPTVPNDAVIEADAYECHPEILTSKHHPTWYQKRGADDNWYFLSPRSRRYPGGDRPTRRTADNRGRLKPGRKKGAADHSKASKGRPRKNLSVGAIEFTENTLAYYVGEPRNENETKTKWLMHELTV
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Gb01143
Panicum virgatum
Pavir.Gb01143
N
0.992
Si010053m.g
Setaria italica
Si010053m.g
N
0.990
Sb06g024980
Sorghum bicolor
Sb06g024980
N
0.967
Si032881m.g
Setaria italica
Si032881m.g
N
0.920
Pavir.Bb02323
Panicum virgatum
Pavir.Bb02323
N
0.903
Pavir.Ba02036
Panicum virgatum
Pavir.Ba02036
N
0.901
LPERR04G17350
Leersia perrieri
LPERR04G17350
I
0.897
OPUNC04G19000
Oryza punctata
OPUNC04G19000
N
0.890
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.874
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.873
Sb02g026510
Sorghum bicolor
Sb02g026510
I
0.872