CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ha00781
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Ha00781
T298877_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ha00781.1.p
NAC/NAM
248
364
PPAFRFHPTDEELILHYLCNRATIPEVDIYNMEPWDLPARAKFGDCEWYLSCFPKKEWHIFCHRKYPISSGYWMATGKARRLTLSGAAGKMLGSKRRLVFHLLSGKMTGWVMHEYHL
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Hb00869
Panicum virgatum
Pavir.Hb00869
N
0.923
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.882
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.873
OB09G25590
Oryza brachyantha
OB09G25590
I
0.872
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.872
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.872
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.872
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.872
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.872
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.872
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.872
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.872
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.872
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.871
Si032702m.g
Setaria italica
Si032702m.g
I
0.870