Pavir.Hb01808 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Hb01808 T298886_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Hb01808.1.p NAC/NAM 25 157

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si026707m.g Setaria italica Si026707m.g N 0.993
Pavir.J13106 Panicum virgatum Pavir.J13106 N 0.993
Sb05g003400 Sorghum bicolor Sb05g003400 N 0.992
Pavir.Ha01768 Panicum virgatum Pavir.Ha01768 N 0.990
GRMZM2G439903 Zea mays GRMZM2G439903 N 0.989
Pavir.Bb01366 Panicum virgatum Pavir.Bb01366 N 0.989
Si025833m.g Setaria italica Si025833m.g N 0.988
OB11G12830 Oryza brachyantha OB11G12830 N 0.976
OS11G0154500 Oryza sativa OS11G0154500 N 0.971
ORUFI11G03420 Oryza rufipogon ORUFI11G03420 N 0.971
ORGLA12G0180300 Oryza glaberrima ORGLA12G0180300 N 0.970
OMERI11G03230 Oryza meridionalis OMERI11G03230 N 0.970
ORGLA11G0032800 Oryza glaberrima ORGLA11G0032800 N 0.970
OPUNC11G03220 Oryza punctata OPUNC11G03220 N 0.970
OGLUM11G03170 Oryza glumaepatula OGLUM11G03170 N 0.970
BGIOSGA034823 Oryza indica BGIOSGA034823 N 0.970
OBART11G03530 Oryza barthii OBART11G03530 N 0.970
ONIVA11G03690 Oryza nivara ONIVA11G03690 N 0.970
OB12G13350 Oryza brachyantha OB12G13350 N 0.964
OPUNC12G03240 Oryza punctata OPUNC12G03240 N 0.959
MDP0000130797 Malus domestica MDP0000130797 N 0.957
MDP0000759504 Malus domestica MDP0000759504 N 0.957
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N 0.957
GLYMA03G35570 Glycine max GLYMA03G35570 N 0.956
GLYMA19G38211 Glycine max GLYMA19G38211 N 0.955
OBART12G03440 Oryza barthii OBART12G03440 N 0.954
Pm001403 Prunus mume Pm001403 N 0.954
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N 0.954
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.954
MDP0000205938 Malus domestica MDP0000205938 N 0.954
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N 0.953
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N 0.953
SapurV1A.0974s0010 Salix purpurea SapurV1A.0974s0010 N 0.953
POPTR_0016s07690 Populus trichocarpa POPTR_0016s07690 N 0.952
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N 0.952
OS12G0156100 Oryza sativa OS12G0156100 N 0.951
BGIOSGA037019 Oryza indica BGIOSGA037019 N 0.951
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N 0.951
ONIVA12G03060 Oryza nivara ONIVA12G03060 N 0.951
SapurV1A.0630s0010 Salix purpurea SapurV1A.0630s0010 N 0.949
Si002586m.g Setaria italica Si002586m.g N 0.949
Pavir.Ea03745 Panicum virgatum Pavir.Ea03745 N 0.947
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N 0.946
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.946
LPERR12G03220 Leersia perrieri LPERR12G03220 N 0.946
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.945
Traes_5DL_43FC1B296 Triticum aestivum Traes_5DL_43FC1B296 N 0.940
F775_13455 Aegilops tauschii F775_13455 N 0.940
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.939
MLOC_60153 Hordeum vulgare MLOC_60153 N 0.939
PK27925.1 Cannabis sativa PK27925.1 N 0.938
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N 0.937
Cucsa.319840 Cucumis sativus Cucsa.319840 I 0.935
LPERR11G02950 Leersia perrieri LPERR11G02950 N 0.934
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N 0.934
Lus10029410.g Linum usitatissimum Lus10029410.g N 0.932
TCM_041364 Theobroma cacao TCM_041364 N 0.931
cassava15688.m1 Manihot esculenta cassava15688.m1 N 0.930
TRIUR3_33275 Triticum urartu TRIUR3_33275 N 0.928
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N 0.927
AMTR_s00040p00117430 Amborella trichopoda AMTR_s00040p00117430 N 0.927
Pavir.J02276 Panicum virgatum Pavir.J02276 N 0.927
mgf024293m Mimulus guttatus mgf024293m N 0.924
Cla018691 Citrullus lanatus Cla018691 N 0.924
Solyc09g010160.1 Solanum lycopersicum Solyc09g010160.1 N 0.924
GRMZM5G832473 Zea mays GRMZM5G832473 N 0.923
Eucgr.J00518 Eucalyptus grandis Eucgr.J00518 N 0.923
Eucgr.J00517 Eucalyptus grandis Eucgr.J00517 N 0.923
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N 0.922
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N 0.920
MTR_7g105170 Medicago truncatula MTR_7g105170 N 0.919
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.919
POPTR_0009s02430 Populus trichocarpa POPTR_0009s02430 N 0.919
Cla003087 Citrullus lanatus Cla003087 I 0.918
PK29014.1 Cannabis sativa PK29014.1 N 0.916
mgf020234m Mimulus guttatus mgf020234m N 0.916
LjSGA_014778.2 Lotus japonicus LjSGA_014778.2 N 0.915
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N 0.915
cassava3989.m1 Manihot esculenta cassava3989.m1 N 0.915
Ca_15160 Cicer arietinum Ca_15160 N 0.913
F775_19761 Aegilops tauschii F775_19761 N 0.912
Cucsa.083530 Cucumis sativus Cucsa.083530 N 0.911
Eucgr.J00520 Eucalyptus grandis Eucgr.J00520 N 0.910
TRAES3BF019300010CFD_g Triticum aestivum TRAES3BF019300010CFD_g N 0.909
MTR_4g052620 Medicago truncatula MTR_4g052620 N 0.909
GLYMA12G31150 Glycine max GLYMA12G31150 N 0.908
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N 0.907
SapurV1A.3648s0010 Salix purpurea SapurV1A.3648s0010 N 0.906
GLYMA13G39160 Glycine max GLYMA13G39160 N 0.906
BRADI2G55780 Brachypodium distachyon BRADI2G55780 N 0.904
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N 0.903
TRIUR3_34272 Triticum urartu TRIUR3_34272 N 0.902
Ca_00818 Cicer arietinum Ca_00818 N 0.902
Lus10004846.g Linum usitatissimum Lus10004846.g N 0.901
Lus10020643.g Linum usitatissimum Lus10020643.g N 0.901
Cla008777 Citrullus lanatus Cla008777 N 0.899
Cucsa.185760 Cucumis sativus Cucsa.185760 N 0.898
evm.TU.supercontig_104.98 Carica papaya evm.TU.supercontig_104.98 N 0.898
Eucgr.C02446 Eucalyptus grandis Eucgr.C02446 N 0.897
Eucgr.J00512 Eucalyptus grandis Eucgr.J00512 N 0.897
BGIOSGA004848 Oryza indica BGIOSGA004848 N 0.895
Eucgr.J00505 Eucalyptus grandis Eucgr.J00505 N 0.895
Eucgr.J00508 Eucalyptus grandis Eucgr.J00508 N 0.895
ONIVA01G42870 Oryza nivara ONIVA01G42870 N 0.895
OGLUM01G42380 Oryza glumaepatula OGLUM01G42380 N 0.895
OBART01G38190 Oryza barthii OBART01G38190 N 0.895
Eucgr.J00513 Eucalyptus grandis Eucgr.J00513 N 0.895
OS01G0862800 Oryza sativa OS01G0862800 N 0.895
ORUFI01G41540 Oryza rufipogon ORUFI01G41540 N 0.895
ORGLA01G0320200 Oryza glaberrima ORGLA01G0320200 N 0.895
OMERI01G35090 Oryza meridionalis OMERI01G35090 N 0.895
OPUNC01G36980 Oryza punctata OPUNC01G36980 N 0.893
LPERR01G32790 Leersia perrieri LPERR01G32790 N 0.893
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N 0.890
MTR_2g086690 Medicago truncatula MTR_2g086690 N 0.890
Eucgr.I00587 Eucalyptus grandis Eucgr.I00587 N 0.890
Eucgr.J00514 Eucalyptus grandis Eucgr.J00514 N 0.888
Eucgr.J00511 Eucalyptus grandis Eucgr.J00511 N 0.887
Eucgr.J00516 Eucalyptus grandis Eucgr.J00516 N 0.881
Eucgr.J00519 Eucalyptus grandis Eucgr.J00519 N 0.880
GLYMA12G09670 Glycine max GLYMA12G09670 N 0.876
Sb03g040720 Sorghum bicolor Sb03g040720 N 0.873
gene15644-v1.0-hybrid Fragaria vesca gene15644-v1.0-hybrid N 0.872
Eucgr.A02637 Eucalyptus grandis Eucgr.A02637 N 0.871