Pavir.Ia04458 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Ia04458 T298901_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia04458.1.p NAC/NAM 12 139

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_22671 Aegilops tauschii F775_22671 N 0.939
F775_22440 Aegilops tauschii F775_22440 N 0.932
BRADI1G29857 Brachypodium distachyon BRADI1G29857 N 0.874
BRADI1G76207 Brachypodium distachyon BRADI1G76207 N 0.939
MLOC_65456 Hordeum vulgare MLOC_65456 N 0.936
LPERR06G23420 Leersia perrieri LPERR06G23420 N 0.921
LPERR03G02450 Leersia perrieri LPERR03G02450 N 0.960
MDP0000868556 Malus domestica MDP0000868556 N 0.883
MDP0000480581 Malus domestica MDP0000480581 N 0.883
cassava13355.valid.m1 Manihot esculenta cassava13355.valid.m1 N 0.885
GSMUA_Achr3G14720_001 Musa acuminata GSMUA_Achr3G14720_001 N 0.896
GSMUA_Achr7G04030_001 Musa acuminata GSMUA_Achr7G04030_001 N 0.873
GSMUA_Achr3G00560_001 Musa acuminata GSMUA_Achr3G00560_001 N 0.914
OBART03G02630 Oryza barthii OBART03G02630 N 0.959
OBART03G02620 Oryza barthii OBART03G02620 N 0.959
OB03G12640 Oryza brachyantha OB03G12640 N 0.951
ORGLA06G0236900 Oryza glaberrima ORGLA06G0236900 N 0.921
ORGLA03G0024300 Oryza glaberrima ORGLA03G0024300 N 0.959
OGLUM03G02560 Oryza glumaepatula OGLUM03G02560 N 0.959
OGLUM06G29360 Oryza glumaepatula OGLUM06G29360 N 0.921
BGIOSGA011514 Oryza indica BGIOSGA011514 N 0.959
BGIOSGA020507 Oryza indica BGIOSGA020507 N 0.921
OLONG_016677 Oryza longistaminata OLONG_016677 N 0.959
OMERI03G02480 Oryza meridionalis OMERI03G02480 N 0.960
OMERI06G27920 Oryza meridionalis OMERI06G27920 N 0.921
ONIVA06G30950 Oryza nivara ONIVA06G30950 N 0.921
ONIVA03G02250 Oryza nivara ONIVA03G02250 N 0.959
OPUNC03G02420 Oryza punctata OPUNC03G02420 N 0.943
OPUNC06G25510 Oryza punctata OPUNC06G25510 N 0.921
ORUFI06G29930 Oryza rufipogon ORUFI06G29930 N 0.921
ORUFI03G02380 Oryza rufipogon ORUFI03G02380 N 0.959
OS03G0133000 Oryza sativa OS03G0133000 N 0.959
OS06G0726300 Oryza sativa OS06G0726300 N 0.921
Pavir.J24394 Panicum virgatum Pavir.J24394 N 0.969
Si006994m.g Setaria italica Si006994m.g N 0.906
Si036757m.g Setaria italica Si036757m.g N 0.967
Sb10g030770 Sorghum bicolor Sb10g030770 N 0.898
Sb01g048130 Sorghum bicolor Sb01g048130 N 0.957
TCM_006499 Theobroma cacao TCM_006499 N 0.875
Traes_4BL_27B9E4CE6 Triticum aestivum Traes_4BL_27B9E4CE6 N 0.877
Traes_4DL_7CB8EC5A8 Triticum aestivum Traes_4DL_7CB8EC5A8 N 0.941
Traes_4DL_B29067862 Triticum aestivum Traes_4DL_B29067862 N 0.939
TRIUR3_33949 Triticum urartu TRIUR3_33949 N 0.954
TRIUR3_32216 Triticum urartu TRIUR3_32216 N 0.941
TRIUR3_18560 Triticum urartu TRIUR3_18560 N 0.950
GRMZM2G059428 Zea mays GRMZM2G059428 N 0.942
GRMZM2G126817 Zea mays GRMZM2G126817 N 0.962
GRMZM2G074358 Zea mays GRMZM2G074358 N 0.898