CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ib00786
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Ib00786
T298905_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ib00786.1.p
NAC/NAM
71
199
PRGVEFNPSDGDLLWHLAAEVGNGQAERHPFINKFITSVVDDRGFSYTHPRDIPGVRQDGHASYFFHRRFESYSNEGDENIIWKKIGTSRSIFLDGTLQGCKEVFVLYADMMSDKGSHQTDWRLHQYHI
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI02G18080
Oryza meridionalis
OMERI02G18080
N
0.984
OLONG_014784
Oryza longistaminata
OLONG_014784
N
0.983
OPUNC03G08410
Oryza punctata
OPUNC03G08410
N
0.983
BRADI1G69617
Brachypodium distachyon
BRADI1G69617
N
0.978
ORUFI03G08860
Oryza rufipogon
ORUFI03G08860
N
0.975
ONIVA06G00900
Oryza nivara
ONIVA06G00900
N
0.975
OGLUM03G08850
Oryza glumaepatula
OGLUM03G08850
N
0.975
ORGLA03G0084800
Oryza glaberrima
ORGLA03G0084800
N
0.974
OBART03G08740
Oryza barthii
OBART03G08740
N
0.974
Sb01g042570
Sorghum bicolor
Sb01g042570
N
0.972
GRMZM5G894234
Zea mays
GRMZM5G894234
N
0.969
GRMZM2G077045
Zea mays
GRMZM2G077045
N
0.963
GRMZM2G342647
Zea mays
GRMZM2G342647
N
0.963
OB03G19030
Oryza brachyantha
OB03G19030
N
0.950
LPERR03G07880
Leersia perrieri
LPERR03G07880
N
0.936
MLOC_50895
Hordeum vulgare
MLOC_50895
N
0.928
Traes_4BL_2136196AE
Triticum aestivum
Traes_4BL_2136196AE
N
0.927
F775_14771
Aegilops tauschii
F775_14771
N
0.896
GSMUA_Achr6G11230_001
Musa acuminata
GSMUA_Achr6G11230_001
I
0.893
PDK_20s1306131g001
Phoenix dactylifera
PDK_20s1306131g001
I
0.877
MDP0000663564
Malus domestica
MDP0000663564
I
0.876