Pavir.J02276 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J02276 T298924_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J02276.1.p NAC/NAM 7 140
Pavir.J02276.2.p NAC/NAM 3 83

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM5G832473 Zea mays GRMZM5G832473 N 0.990
BRADI2G55780 Brachypodium distachyon BRADI2G55780 N 0.987
ORGLA01G0320200 Oryza glaberrima ORGLA01G0320200 N 0.986
ONIVA01G42870 Oryza nivara ONIVA01G42870 N 0.986
OGLUM01G42380 Oryza glumaepatula OGLUM01G42380 N 0.986
ORUFI01G41540 Oryza rufipogon ORUFI01G41540 N 0.986
OMERI01G35090 Oryza meridionalis OMERI01G35090 N 0.986
OS01G0862800 Oryza sativa OS01G0862800 N 0.986
F775_19761 Aegilops tauschii F775_19761 N 0.986
OBART01G38190 Oryza barthii OBART01G38190 N 0.986
BGIOSGA004848 Oryza indica BGIOSGA004848 N 0.986
TRAES3BF019300010CFD_g Triticum aestivum TRAES3BF019300010CFD_g N 0.985
Si002586m.g Setaria italica Si002586m.g N 0.985
OPUNC01G36980 Oryza punctata OPUNC01G36980 N 0.985
Pavir.Ea03745 Panicum virgatum Pavir.Ea03745 N 0.985
Sb03g040720 Sorghum bicolor Sb03g040720 N 0.981
LPERR01G32790 Leersia perrieri LPERR01G32790 N 0.979
TRIUR3_34272 Triticum urartu TRIUR3_34272 N 0.979
OGLUM03G09050 Oryza glumaepatula OGLUM03G09050 N 0.962
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.962
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.959
ONIVA06G01110 Oryza nivara ONIVA06G01110 N 0.956
OMERI11G03230 Oryza meridionalis OMERI11G03230 N 0.949
Traes_1AL_179FC28F2 Triticum aestivum Traes_1AL_179FC28F2 N 0.949
BGIOSGA034823 Oryza indica BGIOSGA034823 N 0.949
ONIVA11G03690 Oryza nivara ONIVA11G03690 N 0.949
ORGLA12G0180300 Oryza glaberrima ORGLA12G0180300 N 0.949
ORGLA11G0032800 Oryza glaberrima ORGLA11G0032800 N 0.949
OGLUM11G03170 Oryza glumaepatula OGLUM11G03170 N 0.949
OPUNC11G03220 Oryza punctata OPUNC11G03220 N 0.949
OBART11G03530 Oryza barthii OBART11G03530 N 0.949
ORUFI11G03420 Oryza rufipogon ORUFI11G03420 N 0.948
OS11G0154500 Oryza sativa OS11G0154500 N 0.948
GLYMA19G38211 Glycine max GLYMA19G38211 N 0.945
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N 0.944
GLYMA03G35570 Glycine max GLYMA03G35570 N 0.944
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N 0.942
Pm001403 Prunus mume Pm001403 N 0.940
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.940
MDP0000130797 Malus domestica MDP0000130797 N 0.938
MDP0000759504 Malus domestica MDP0000759504 N 0.938
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N 0.937
Traes_1AL_C76BCC7EC Triticum aestivum Traes_1AL_C76BCC7EC N 0.936
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.936
Pavir.Ha01768 Panicum virgatum Pavir.Ha01768 N 0.935
OB11G12830 Oryza brachyantha OB11G12830 N 0.935
TCM_041364 Theobroma cacao TCM_041364 N 0.935
OB05G26010 Oryza brachyantha OB05G26010 N 0.934
MLOC_7757 Hordeum vulgare MLOC_7757 N 0.934
MDP0000205938 Malus domestica MDP0000205938 N 0.933
PK27925.1 Cannabis sativa PK27925.1 N 0.930
Si026707m.g Setaria italica Si026707m.g N 0.930
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N 0.928
LjSGA_014778.2 Lotus japonicus LjSGA_014778.2 N 0.927
Pavir.Hb01808 Panicum virgatum Pavir.Hb01808 N 0.927
Si022966m.g Setaria italica Si022966m.g N 0.926
Pavir.J13106 Panicum virgatum Pavir.J13106 N 0.926
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N 0.925
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N 0.925
mgf024293m Mimulus guttatus mgf024293m N 0.925
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N 0.923
Pavir.J04751 Panicum virgatum Pavir.J04751 N 0.923
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N 0.923
SapurV1A.0974s0010 Salix purpurea SapurV1A.0974s0010 N 0.921
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N 0.920
SapurV1A.0630s0010 Salix purpurea SapurV1A.0630s0010 N 0.916
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N 0.916
Solyc09g010160.1 Solanum lycopersicum Solyc09g010160.1 N 0.916
POPTR_0016s07690 Populus trichocarpa POPTR_0016s07690 N 0.916
Pavir.J36282 Panicum virgatum Pavir.J36282 N 0.914
Sb09g021780 Sorghum bicolor Sb09g021780 N 0.913
GRMZM2G439903 Zea mays GRMZM2G439903 N 0.910
GRMZM2G465835 Zea mays GRMZM2G465835 N 0.909
Sb05g003400 Sorghum bicolor Sb05g003400 N 0.906
cassava15688.m1 Manihot esculenta cassava15688.m1 N 0.906
POPTR_0009s02430 Populus trichocarpa POPTR_0009s02430 N 0.901
OBART12G03440 Oryza barthii OBART12G03440 N 0.898
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N 0.898
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N 0.898
OS12G0156100 Oryza sativa OS12G0156100 N 0.898
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N 0.898
GLYMA12G31150 Glycine max GLYMA12G31150 N 0.898
ONIVA12G03060 Oryza nivara ONIVA12G03060 N 0.898
BGIOSGA037019 Oryza indica BGIOSGA037019 N 0.898
GLYMA13G39160 Glycine max GLYMA13G39160 N 0.897
Eucgr.J00517 Eucalyptus grandis Eucgr.J00517 N 0.897
PK29014.1 Cannabis sativa PK29014.1 N 0.896
Lus10004846.g Linum usitatissimum Lus10004846.g N 0.896
Lus10020643.g Linum usitatissimum Lus10020643.g N 0.896
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N 0.896
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N 0.896
LPERR05G14390 Leersia perrieri LPERR05G14390 N 0.895
Gorai.006G113000 Gossypium raimondii Gorai.006G113000 N 0.895
evm.TU.supercontig_104.98 Carica papaya evm.TU.supercontig_104.98 N 0.891
Cucsa.319840 Cucumis sativus Cucsa.319840 I 0.889
Pavir.Bb01366 Panicum virgatum Pavir.Bb01366 N 0.887
Si025833m.g Setaria italica Si025833m.g N 0.886
MTR_4g052620 Medicago truncatula MTR_4g052620 N 0.884
Cucsa.185760 Cucumis sativus Cucsa.185760 N 0.884
LPERR11G02950 Leersia perrieri LPERR11G02950 N 0.884
cassava3989.m1 Manihot esculenta cassava3989.m1 N 0.882
Cla008777 Citrullus lanatus Cla008777 N 0.880
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.879
Eucgr.J00518 Eucalyptus grandis Eucgr.J00518 N 0.878
MTR_7g105170 Medicago truncatula MTR_7g105170 N 0.878
Ca_15160 Cicer arietinum Ca_15160 N 0.874
Cla003087 Citrullus lanatus Cla003087 I 0.872