CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.J04931
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J04931
T298939_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J04931.1.p
NAC/NAM
23
168
PPGFRFRPTDEELVVQYLRRKALGVPLPAAVIPVVRDLYSLDPWDIPAAAAADASEGEKYFFAVRPAGVGGSGCSGKLGGGARAATASGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFAPRRNKKKASSAALAAGWVMHEYRL
Pavir.J04931.2.p
NAC/NAM
23
167
PPGFRFRPTDEELVVQYLRRKALGVPLPAAVIPVVRDLYSLDPWDIPAAAADASEGEKYFFAVRPAGVGGSGCSGKLGGGARAATASGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFAPRRNKKKASSAALAAGWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
90 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000010613
Ailuropoda melanoleuca
ENSAMEG00000010613
I
0.000
IRF7
Bos taurus
ENSBTAG00000047680
I
0.000
IRF7
Callithrix jacchus
ENSCJAG00000012124
I
0.000
ENSCSAG00000010883
Chlorocebus sabaeus
ENSCSAG00000010883
I
0.000
IRF7
Dasypus novemcinctus
ENSDNOG00000006293
I
0.000
Irf7
Dipodomys ordii
ENSDORG00000014096
I
0.000
IRF7
Equus caballus
ENSECAG00000009744
I
0.000
IRF7
Echinops telfairi
ENSETEG00000004078
I
0.000
IRF7
Felis catus
ENSFCAG00000031821
I
0.000
IRF7
Homo sapiens
ENSG00000185507
D
0.000
IRF7
Gorilla gorilla
ENSGGOG00000008341
I
0.000
IRF7
Loxodonta africana
ENSLAFG00000032120
I
0.000
IRF7
Macaca mulatta
ENSMMUG00000004014
I
0.000
ENSMPUG00000008845
Mustela putorius furo
ENSMPUG00000008845
I
0.000
Irf7
Mus musculus
ENSMUSG00000025498
D
0.000
ENSNLEG00000008419
Nomascus leucogenys
ENSNLEG00000008419
I
0.000
ENSOARG00000006626
Ovis aries
ENSOARG00000006626
I
0.000
IRF7
Oryctolagus cuniculus
ENSOCUG00000002339
I
0.000
IRF7
Otolemur garnettii
ENSOGAG00000004986
I
0.000
ENSP00000329411-D1
Bos grunniens
ENSP00000329411-D1
I
0.000
ENSPANG00000007390
Papio anubis
ENSPANG00000007390
I
0.000
IRF7
Procavia capensis
ENSPCAG00000010286
I
0.000
IRF7
Pteropus vampyrus
ENSPVAG00000006873
I
0.000
Irf7
Rattus norvegicus
ENSRNOG00000017414
I
0.000
ENSSHAG00000004173
Sarcophilus harrisii
ENSSHAG00000004173
I
0.000
IRF7
Sus scrofa
ENSSSCG00000012853
I
0.000
ENSSTOG00000005711
Ictidomys tridecemlineatus
ENSSTOG00000005711
I
0.000
IRF7
Tursiops truncatus
ENSTTRG00000011148
I
0.000