Pavir.J24971 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J24971 T298992_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J24971.1.p NAC/NAM 24 122
Pavir.J24971.2.p NAC/NAM 24 118

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.Gb01850 Panicum virgatum Pavir.Gb01850 I 0.966
ORUFI02G22930 Oryza rufipogon ORUFI02G22930 I 0.976
ORUFI01G18470 Oryza rufipogon ORUFI01G18470 I 0.913
ORUFI01G00320 Oryza rufipogon ORUFI01G00320 I 0.913
ORGLA12G0187900 Oryza glaberrima ORGLA12G0187900 I 0.913
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I 0.914
ORGLA04G0119700 Oryza glaberrima ORGLA04G0119700 I 0.969
OPUNC08G18240 Oryza punctata OPUNC08G18240 I 0.915
OPUNC02G19580 Oryza punctata OPUNC02G19580 I 0.876
OPUNC01G00320 Oryza punctata OPUNC01G00320 I 0.918
ONIVA08G22710 Oryza nivara ONIVA08G22710 I 0.914
ONIVA04G13100 Oryza nivara ONIVA04G13100 I 0.969
ONIVA02G24080 Oryza nivara ONIVA02G24080 I 0.976
ONIVA01G18370 Oryza nivara ONIVA01G18370 I 0.913
ONIVA01G00280 Oryza nivara ONIVA01G00280 I 0.913
OMERI02G21390 Oryza meridionalis OMERI02G21390 I 0.976
ORUFI04G16370 Oryza rufipogon ORUFI04G16370 I 0.969
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I 0.914
OS01G0104500 Oryza sativa OS01G0104500 I 0.913
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I 0.927
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I 0.936
mgf002183m Mimulus guttatus mgf002183m I 0.881
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I 0.930
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I 0.882
Si010553m.g Setaria italica Si010553m.g I 0.963
SELMODRAFT_86855 Selaginella moellendorffii SELMODRAFT_86855 I 0.889
SELMODRAFT_71307 Selaginella moellendorffii SELMODRAFT_71307 I 0.889
Sb06g019010 Sorghum bicolor Sb06g019010 I 0.971
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I 0.888
PGSC0003DMG400009920 Solanum tuberosum PGSC0003DMG400009920 I 0.892
OS08G0511200 Oryza sativa OS08G0511200 I 0.914
OS04G0460600 Oryza sativa OS04G0460600 I 0.969
OS02G0579000 Oryza sativa OS02G0579000 I 0.976
OS01G0393100 Oryza sativa OS01G0393100 I 0.913
OMERI01G15230 Oryza meridionalis OMERI01G15230 I 0.913
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I 0.929
MLOC_13932 Hordeum vulgare MLOC_13932 I 0.914
LPERR08G17020 Leersia perrieri LPERR08G17020 I 0.925
LPERR04G11740 Leersia perrieri LPERR04G11740 I 0.969
LPERR01G00270 Leersia perrieri LPERR01G00270 I 0.911
GSMUA_Achr7G23250_001 Musa acuminata GSMUA_Achr7G23250_001 I 0.891
GRMZM2G139700 Zea mays GRMZM2G139700 I 0.915
GRMZM2G009892 Zea mays GRMZM2G009892 I 0.968
F775_20638 Aegilops tauschii F775_20638 I 0.930
BRADI3G46900 Brachypodium distachyon BRADI3G46900 I 0.972
BGIOSGA026695 Oryza indica BGIOSGA026695 I 0.914
BGIOSGA016546 Oryza indica BGIOSGA016546 I 0.969
BGIOSGA008492 Oryza indica BGIOSGA008492 I 0.976
BGIOSGA002597 Oryza indica BGIOSGA002597 I 0.913
BGIOSGA001578 Oryza indica BGIOSGA001578 I 0.913
MLOC_65286 Hordeum vulgare MLOC_65286 I 0.911
MTR_1g008740 Medicago truncatula MTR_1g008740 I 0.879
OGLUM01G19440 Oryza glumaepatula OGLUM01G19440 I 0.913
OGLUM02G22030 Oryza glumaepatula OGLUM02G22030 I 0.976
OGLUM04G14830 Oryza glumaepatula OGLUM04G14830 I 0.969
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I 0.914
OLONG_008218 Oryza longistaminata OLONG_008218 I 0.960
OLONG_022415 Oryza longistaminata OLONG_022415 I 0.913
OLONG_023103 Oryza longistaminata OLONG_023103 I 0.884
OMERI01G15210 Oryza meridionalis OMERI01G15210 I 0.913
OGLUM01G00350 Oryza glumaepatula OGLUM01G00350 I 0.913
OB01G10300 Oryza brachyantha OB01G10300 I 0.913
OBART04G14970 Oryza barthii OBART04G14970 I 0.969
OBART01G00360 Oryza barthii OBART01G00360 I 0.913
OBART02G21850 Oryza barthii OBART02G21850 I 0.976
OBART01G16620 Oryza barthii OBART01G16620 I 0.913
Sb04g023990 Sorghum bicolor Sb04g023990 N 0.963
OB02G29280 Oryza brachyantha OB02G29280 N 0.981
LPERR02G17680 Leersia perrieri LPERR02G17680 N 0.981
TRIUR3_09915 Triticum urartu TRIUR3_09915 N 0.937
Traes_2DL_DF7B995C9 Triticum aestivum Traes_2DL_DF7B995C9 N 0.937
Traes_2BL_6AEE8AC28 Triticum aestivum Traes_2BL_6AEE8AC28 N 0.937
Traes_2AL_57BF37A86 Triticum aestivum Traes_2AL_57BF37A86 N 0.937
Si017567m.g Setaria italica Si017567m.g N 0.983
GRMZM5G898290 Zea mays GRMZM5G898290 N 0.983
F775_32832 Aegilops tauschii F775_32832 N 0.937