Pavir.J27836 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J27836 T298998_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J27836.1.p NAC/NAM 21 151

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.Eb00976 Panicum virgatum Pavir.Eb00976 I 0.953
Pavir.Bb02033 Panicum virgatum Pavir.Bb02033 I 0.943
Si002074m.g Setaria italica Si002074m.g I 0.941
Pavir.Ba02955 Panicum virgatum Pavir.Ba02955 I 0.931
Pavir.Eb00839 Panicum virgatum Pavir.Eb00839 I 0.927
Si002003m.g Setaria italica Si002003m.g N 0.925
TRAES3BF020100120CFD_g Triticum aestivum TRAES3BF020100120CFD_g I 0.917
MLOC_72737 Hordeum vulgare MLOC_72737 I 0.913
TRIUR3_23644 Triticum urartu TRIUR3_23644 I 0.911
Si030284m.g Setaria italica Si030284m.g N 0.908
Traes_3AS_4220612F3 Triticum aestivum Traes_3AS_4220612F3 I 0.905
GSMUA_Achr3G09520_001 Musa acuminata GSMUA_Achr3G09520_001 I 0.903
Traes_3DS_930F3B5AD Triticum aestivum Traes_3DS_930F3B5AD I 0.897
F775_24687 Aegilops tauschii F775_24687 I 0.897
GSMUA_Achr9G16920_001 Musa acuminata GSMUA_Achr9G16920_001 I 0.895
Traes_5AL_373E730BB Triticum aestivum Traes_5AL_373E730BB I 0.894
evm.TU.supercontig_594.1 Carica papaya evm.TU.supercontig_594.1 I 0.893
chr1.CM0104.260.nc Lotus japonicus chr1.CM0104.260.nc I 0.891
Cla012339 Citrullus lanatus Cla012339 I 0.891
GSMUA_Achr5G07600_001 Musa acuminata GSMUA_Achr5G07600_001 I 0.891
Gorai.013G118000 Gossypium raimondii Gorai.013G118000 I 0.891
Ca_08255 Cicer arietinum Ca_08255 I 0.890
F775_16032 Aegilops tauschii F775_16032 I 0.889
OS01G0104500 Oryza sativa OS01G0104500 I 0.888
OB01G10300 Oryza brachyantha OB01G10300 I 0.888
GLYMA16G04720 Glycine max GLYMA16G04720 I 0.887
GSMUA_Achr6G08600_001 Musa acuminata GSMUA_Achr6G08600_001 I 0.887
GLYMA02G07760 Glycine max GLYMA02G07760 I 0.885
GLYMA16G26810 Glycine max GLYMA16G26810 I 0.885
Traes_5BL_59AFA4B01 Triticum aestivum Traes_5BL_59AFA4B01 I 0.885
Eucgr.A02074 Eucalyptus grandis Eucgr.A02074 I 0.884
GSMUA_Achr8G21470_001 Musa acuminata GSMUA_Achr8G21470_001 I 0.884
Cucsa.002980 Cucumis sativus Cucsa.002980 I 0.883
GLYMA19G28515 Glycine max GLYMA19G28515 I 0.883
GSMUA_Achr6G32290_001 Musa acuminata GSMUA_Achr6G32290_001 I 0.882
TRIUR3_00447 Triticum urartu TRIUR3_00447 N 0.880
Traes_7BS_BA1111780 Triticum aestivum Traes_7BS_BA1111780 N 0.879
Traes_7AL_C8835D919 Triticum aestivum Traes_7AL_C8835D919 N 0.879
TCM_026028 Theobroma cacao TCM_026028 I 0.878
Gorai.007G267700 Gossypium raimondii Gorai.007G267700 I 0.878
Bo9g175670 Brassica oleracea Bo9g175670 I 0.877
Traes_7AL_38B48B7B2 Triticum aestivum Traes_7AL_38B48B7B2 N 0.876
Sb03g008860 Sorghum bicolor Sb03g008860 N 0.875
ORUFI01G18470 Oryza rufipogon ORUFI01G18470 I 0.874
OLONG_022415 Oryza longistaminata OLONG_022415 I 0.874
OMERI01G15230 Oryza meridionalis OMERI01G15230 I 0.874
OGLUM01G19440 Oryza glumaepatula OGLUM01G19440 I 0.874
OGLUM01G00350 Oryza glumaepatula OGLUM01G00350 I 0.874
OBART01G00360 Oryza barthii OBART01G00360 I 0.874
OBART01G16620 Oryza barthii OBART01G16620 I 0.874
BGIOSGA001578 Oryza indica BGIOSGA001578 I 0.874
ONIVA01G00280 Oryza nivara ONIVA01G00280 I 0.874
OS01G0393100 Oryza sativa OS01G0393100 I 0.874
ANAC087 Arabidopsis thaliana AT5G18270 D 0.874
ORUFI01G00320 Oryza rufipogon ORUFI01G00320 I 0.874
ORGLA12G0187900 Oryza glaberrima ORGLA12G0187900 I 0.874
ONIVA01G18370 Oryza nivara ONIVA01G18370 I 0.874
BGIOSGA002597 Oryza indica BGIOSGA002597 I 0.874
SapurV1A.0867s0130 Salix purpurea SapurV1A.0867s0130 I 0.873
SapurV1A.1196s0010 Salix purpurea SapurV1A.1196s0010 I 0.873
POPTR_0019s04710 Populus trichocarpa POPTR_0019s04710 I 0.873
Traes_4DL_D84567626 Triticum aestivum Traes_4DL_D84567626 I 0.873
cassava35698.valid.m1 Manihot esculenta cassava35698.valid.m1 I 0.873
F775_29256 Aegilops tauschii F775_29256 I 0.873
29950.m001171 Ricinus communis 29950.m001171 I 0.872