Pavir.J36282 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J36282 T299011_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J36282.1.p NAC/NAM 83 214

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK27925.1 Cannabis sativa PK27925.1 N 0.873
30055.m001588 Ricinus communis 30055.m001588 N 0.924
Cla018691 Citrullus lanatus Cla018691 N 0.892
TRIUR3_34272 Triticum urartu TRIUR3_34272 N 0.905
TRAES3BF019300010CFD_g Triticum aestivum TRAES3BF019300010CFD_g N 0.928
Traes_1AL_C76BCC7EC Triticum aestivum Traes_1AL_C76BCC7EC N 0.972
Traes_1AL_179FC28F2 Triticum aestivum Traes_1AL_179FC28F2 N 0.978
TCM_041364 Theobroma cacao TCM_041364 N 0.902
Si022966m.g Setaria italica Si022966m.g N 0.991
Si002586m.g Setaria italica Si002586m.g N 0.885
Sb09g021780 Sorghum bicolor Sb09g021780 N 0.989
Sb03g040720 Sorghum bicolor Sb03g040720 N 0.961
OS12G0156100 Oryza sativa OS12G0156100 N 0.913
OS01G0862800 Oryza sativa OS01G0862800 N 0.950
ORUFI01G41540 Oryza rufipogon ORUFI01G41540 N 0.950
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.880
cassava32867.m1 Manihot esculenta cassava32867.m1 N 0.920
Cucsa.083530 Cucumis sativus Cucsa.083530 N 0.895
Thhalv10014563m.g Eutrema salsugineum Thhalv10014563m.g N 0.872
Pavir.J04751 Panicum virgatum Pavir.J04751 N 0.990
Pavir.J02276 Panicum virgatum Pavir.J02276 N 0.914
Lus10020643.g Linum usitatissimum Lus10020643.g N 0.941
Lus10004846.g Linum usitatissimum Lus10004846.g N 0.941
Gorai.006G113000 Gossypium raimondii Gorai.006G113000 N 0.886
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N 0.927
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N 0.903
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N 0.877
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N 0.889
Carubv10001788m.g Capsella rubella Carubv10001788m.g N 0.879
Cagra.0846s0014 Capsella grandiflora Cagra.0846s0014 N 0.879
Bostr.26527s0039 Boechera stricta Bostr.26527s0039 N 0.881
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.928
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N 0.913
ORGLA01G0320200 Oryza glaberrima ORGLA01G0320200 N 0.950
OPUNC12G03240 Oryza punctata OPUNC12G03240 N 0.918
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.892
GRMZM5G832473 Zea mays GRMZM5G832473 N 0.890
GRMZM2G465835 Zea mays GRMZM2G465835 N 0.989
anac090 Arabidopsis lyrata fgenesh2_kg.6__2228__AT5G22380.1 N 0.898
F775_19761 Aegilops tauschii F775_19761 N 0.927
BRADI2G55780 Brachypodium distachyon BRADI2G55780 N 0.924
Bra020188 Brassica rapa Bra020188 N 0.873
Bra006624 Brassica rapa Bra006624 N 0.872
Bra002408 Brassica rapa Bra002408 N 0.874
Bo9g148540 Brassica oleracea Bo9g148540 N 0.873
Bo3g016870 Brassica oleracea Bo3g016870 N 0.881
Bo2g023870 Brassica oleracea Bo2g023870 N 0.873
BGIOSGA037019 Oryza indica BGIOSGA037019 N 0.913
BGIOSGA004848 Oryza indica BGIOSGA004848 N 0.950
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N 0.934
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.887
LPERR01G32790 Leersia perrieri LPERR01G32790 N 0.942
OPUNC05G16010 Oryza punctata OPUNC05G16010 N 0.904
OPUNC01G36980 Oryza punctata OPUNC01G36980 N 0.950
ONIVA12G03060 Oryza nivara ONIVA12G03060 N 0.913
ONIVA01G42870 Oryza nivara ONIVA01G42870 N 0.950
OMERI01G35090 Oryza meridionalis OMERI01G35090 N 0.950
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N 0.913
OGLUM01G42380 Oryza glumaepatula OGLUM01G42380 N 0.950
OBART12G03440 Oryza barthii OBART12G03440 N 0.913
OBART01G38190 Oryza barthii OBART01G38190 N 0.950
OB12G13350 Oryza brachyantha OB12G13350 N 0.902
OB05G26010 Oryza brachyantha OB05G26010 N 0.980
MLOC_7757 Hordeum vulgare MLOC_7757 N 0.975
LPERR11G02950 Leersia perrieri LPERR11G02950 N 0.919
LPERR05G14390 Leersia perrieri LPERR05G14390 N 0.974
NAC090 Arabidopsis thaliana AT5G22380 N 0.888