SapurV1A.0129s0210 (Salix purpurea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 SapurV1A.0129s0210 T299055_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC007
M07164_2.00
Arabidopsis thaliana
TTRCKTVHDNNNYAMG

CKTRNNNHDBAMGYAA
Dap-seq
OMalley et al.(2016)
VND4_colamp_a
0.932 0.868
NAC007
M07165_2.00
Arabidopsis thaliana
TGCKTVHDNHDYAMG

CKTRHDNHDBAMGCA
Dap-seq
OMalley et al.(2016)
VND4_col
0.932 0.868
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG

CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.927 0.842
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG

CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.923 0.842
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN

NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.923 0.842
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG

CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.898 0.825
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN

NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.898 0.825
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND

HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.875 0.807
NAC066
M00978_2.00
Arabidopsis thaliana
NBNNHNBNNN

NNNVNDNNVN
PBM
Lindemose et al.(2014)
NST2
0.874 0.763
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0129s0210.1.p NAC/NAM 8 135
SapurV1A.0129s0210.2.p NAC/NAM 8 135
SapurV1A.0129s0210.3.p NAC/NAM 8 135
SapurV1A.0129s0210.4.p NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Salix purpurea TFs

Invalid Input OrderBy

332 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action