PK11990.1 (Cannabis sativa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 PK11990.1 T299336_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK11990.1
M01290_2.00		 Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH		 PBM
Lambert et al.(2019)
pTH11336		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.948 0.816
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.948 0.816
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.928 0.763
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.928 0.763
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.884 0.702
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.884 0.702
For this family, TFs with SR scores > 0.870 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01290_2.00 NAC/NAM 52 192

DNA Binding Domains

Protein ID Domain From To Sequence
PK11990.1 NAC/NAM 93 233

Links

Other NAC/NAM family TFs
Other Cannabis sativa TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.15697s0168 Boechera stricta Bostr.15697s0168 I 0.985
orange1.1g012118m.g Citrus sinensis orange1.1g012118m.g I 0.980
Cucsa.116800 Cucumis sativus Cucsa.116800 I 0.980
Aquca_001_00211 Aquilegia coerulea Aquca_001_00211 I 0.980
MTR_8g102240 Medicago truncatula MTR_8g102240 I 0.980
Cla017075 Citrullus lanatus Cla017075 I 0.980
Ca_05913 Cicer arietinum Ca_05913 I 0.980
Ciclev10010579m.g Citrus clementina Ciclev10010579m.g I 0.980
GRMZM2G058518 Zea mays GRMZM2G058518 I 0.977
Gorai.009G166300 Gossypium raimondii Gorai.009G166300 I 0.975
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I 0.969
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I 0.966
30190.m010767 Ricinus communis 30190.m010767 I 0.966
Gorai.010G157600 Gossypium raimondii Gorai.010G157600 I 0.966
cassava1596.valid.m1 Manihot esculenta cassava1596.valid.m1 I 0.965
MTR_8g069160 Medicago truncatula MTR_8g069160 I 0.964
MTR_4g088245 Medicago truncatula MTR_4g088245 I 0.964
Ca_06348 Cicer arietinum Ca_06348 I 0.964
evm.TU.supercontig_2586.1 Carica papaya evm.TU.supercontig_2586.1 I 0.963
GLYMA13G24320 Glycine max GLYMA13G24320 I 0.963
MDP0000309351 Malus domestica MDP0000309351 I 0.962
MDP0000276278 Malus domestica MDP0000276278 I 0.962
Pm010104 Prunus mume Pm010104 I 0.962
TCM_029798 Theobroma cacao TCM_029798 I 0.962
Solyc07g053590.2 Solanum lycopersicum Solyc07g053590.2 I 0.961
PGSC0003DMG400009381 Solanum tuberosum PGSC0003DMG400009381 I 0.961
GLYMA12G33460 Glycine max GLYMA12G33460 I 0.960
GLYMA06G44250 Glycine max GLYMA06G44250 I 0.960
GLYMA13G36980 Glycine max GLYMA13G36980 I 0.960
GLYMA07G32250 Glycine max GLYMA07G32250 I 0.960
Ca_11273 Cicer arietinum Ca_11273 I 0.960
Ca_02457 Cicer arietinum Ca_02457 I 0.959
GLYMA12G13710 Glycine max GLYMA12G13710 I 0.958
MTR_2g090735 Medicago truncatula MTR_2g090735 I 0.958
ANAC010 Vitis vinifera VIT_10s0003g00350 I 0.956
Cucsa.126960 Cucumis sativus Cucsa.126960 I 0.955
Eucgr.D00591 Eucalyptus grandis Eucgr.D00591 I 0.953
MTR_4g078875 Medicago truncatula MTR_4g078875 I 0.952
Bra030099 Brassica rapa Bra030099 I 0.952
Bo7g047040 Brassica oleracea Bo7g047040 I 0.951
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I 0.949
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I 0.949
cassava46566.m1 Manihot esculenta cassava46566.m1 I 0.949
Lus10015392.g Linum usitatissimum Lus10015392.g I 0.949
ORGLA06G0153500 Oryza glaberrima ORGLA06G0153500 I 0.948
Cagra.1822s0012 Capsella grandiflora Cagra.1822s0012 I 0.948
OGLUM06G19630 Oryza glumaepatula OGLUM06G19630 I 0.948
Thhalv10008249m.g Eutrema salsugineum Thhalv10008249m.g I 0.948
BGIOSGA021039 Oryza indica BGIOSGA021039 I 0.948
ONIVA06G22200 Oryza nivara ONIVA06G22200 I 0.948
OMERI06G18870 Oryza meridionalis OMERI06G18870 I 0.948
NAC010 Arabidopsis thaliana AT1G28470 D 0.948
Bo5g055990 Brassica oleracea Bo5g055990 I 0.948
OS06G0560300 Oryza sativa OS06G0560300 I 0.948
ANAC010 Arabidopsis lyrata scaffold_103183.1 I 0.948
Carubv10009638m.g Capsella rubella Carubv10009638m.g I 0.948
OBART06G18520 Oryza barthii OBART06G18520 I 0.948
Bra032910 Brassica rapa Bra032910 I 0.948
ORUFI06G19520 Oryza rufipogon ORUFI06G19520 I 0.948
POPTR_0011s05740 Populus trichocarpa POPTR_0011s05740 I 0.947
Lus10013967.g Linum usitatissimum Lus10013967.g I 0.945
GLYMA15G08480 Glycine max GLYMA15G08480 I 0.942
GLYMA13G30800 Glycine max GLYMA13G30800 I 0.941
chr3.CM0160.860.nd Lotus japonicus chr3.CM0160.860.nd I 0.939
PK28347.1 Cannabis sativa PK28347.1 I 0.938
Cla009808 Citrullus lanatus Cla009808 I 0.937
chr6.LjT04E21.30.nc Lotus japonicus chr6.LjT04E21.30.nc I 0.936
Eucgr.D00592 Eucalyptus grandis Eucgr.D00592 I 0.936
GSMUA_Achr4G30940_001 Musa acuminata GSMUA_Achr4G30940_001 I 0.935
OS01G0191300 Oryza sativa OS01G0191300 I 0.933
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.933
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.933
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.933
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.933
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.933
OB01G15780 Oryza brachyantha OB01G15780 I 0.933
OBART01G05840 Oryza barthii OBART01G05840 I 0.933
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.933
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.933
Ciclev10015976m.g Citrus clementina Ciclev10015976m.g I 0.933
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.933
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I 0.932
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I 0.932
GSMUA_Achr4G02730_001 Musa acuminata GSMUA_Achr4G02730_001 I 0.930
Cla011431 Citrullus lanatus Cla011431 I 0.930
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.930
MDP0000124509 Malus domestica MDP0000124509 I 0.930
SapurV1A.0012s0710 Salix purpurea SapurV1A.0012s0710 I 0.930
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.929
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.929
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.929
SapurV1A.0032s0620 Salix purpurea SapurV1A.0032s0620 I 0.929
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.929
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.929
TCM_037747 Theobroma cacao TCM_037747 I 0.929
29912.m005354 Ricinus communis 29912.m005354 I 0.929
Pm027280 Prunus mume Pm027280 I 0.929
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.929
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.929
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.929
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.929
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.929
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.929
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I 0.929
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.929
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.929
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.928
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.928
GRMZM2G166721 Zea mays GRMZM2G166721 I 0.928
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.928
GRMZM2G112681 Zea mays GRMZM2G112681 I 0.928
Pavir.J13205 Panicum virgatum Pavir.J13205 I 0.928
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.928
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I 0.928
Sb03g003170 Sorghum bicolor Sb03g003170 I 0.928
PK27085.1 Cannabis sativa PK27085.1 D 0.928
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.928
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.928
anac075 Arabidopsis thaliana AT4G29230 D 0.928
Pavir.J05241 Panicum virgatum Pavir.J05241 I 0.927
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I 0.927
Bra024152 Brassica rapa Bra024152 I 0.927
TRIUR3_27393 Triticum urartu TRIUR3_27393 I 0.927
Bo7g113660 Brassica oleracea Bo7g113660 I 0.927
Si002301m.g Setaria italica Si002301m.g I 0.927
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I 0.927
Bo1g016630 Brassica oleracea Bo1g016630 I 0.927
Sb03g030750 Sorghum bicolor Sb03g030750 I 0.927
Bra011090 Brassica rapa Bra011090 I 0.927
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.926
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I 0.926
Si001527m.g Setaria italica Si001527m.g I 0.925
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I 0.925
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I 0.925
GLYMA05G36031 Glycine max GLYMA05G36031 I 0.924
POPTR_0004s04900 Populus trichocarpa POPTR_0004s04900 I 0.923
ORUFI01G29010 Oryza rufipogon ORUFI01G29010 I 0.921
OMERI01G23720 Oryza meridionalis OMERI01G23720 I 0.921
OPUNC01G25960 Oryza punctata OPUNC01G25960 I 0.921
OLONG_014922 Oryza longistaminata OLONG_014922 I 0.920
Eucgr.E03226 Eucalyptus grandis Eucgr.E03226 I 0.919
gw1.251.65.1 Physcomitrella patens gw1.251.65.1 I 0.917
LPERR01G22300 Leersia perrieri LPERR01G22300 I 0.917
cassava16121.m1 Manihot esculenta cassava16121.m1 I 0.916
Bra024197 Brassica rapa Bra024197 I 0.916
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.916
Pavir.Eb02718 Panicum virgatum Pavir.Eb02718 I 0.916
GLYMA07G15180 Glycine max GLYMA07G15180 I 0.915
MTR_2g014680 Medicago truncatula MTR_2g014680 I 0.913
29983.m003125 Ricinus communis 29983.m003125 I 0.912
TCM_008229 Theobroma cacao TCM_008229 I 0.912
Gorai.008G155200 Gossypium raimondii Gorai.008G155200 I 0.912
F775_16052 Aegilops tauschii F775_16052 I 0.910
GSMUA_Achr6G27000_001 Musa acuminata GSMUA_Achr6G27000_001 I 0.910
ANAC073 Vitis vinifera VIT_12s0028g03050 I 0.909
Solyc02g077610.2 Solanum lycopersicum Solyc02g077610.2 I 0.907
BGIOSGA001044 Oryza indica BGIOSGA001044 I 0.906
POPTR_0017s04800 Populus trichocarpa POPTR_0017s04800 I 0.905
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I 0.905
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I 0.904
OGLUM01G29870 Oryza glumaepatula OGLUM01G29870 I 0.904
ONIVA01G29490 Oryza nivara ONIVA01G29490 I 0.904
MLOC_75795 Hordeum vulgare MLOC_75795 I 0.904
SapurV1A.1828s0030 Salix purpurea SapurV1A.1828s0030 I 0.903
SapurV1A.3101s0030 Salix purpurea SapurV1A.3101s0030 I 0.903
SapurV1A.2554s0030 Salix purpurea SapurV1A.2554s0030 I 0.903
Bo7g113170 Brassica oleracea Bo7g113170 I 0.903
Eucgr.D00594 Eucalyptus grandis Eucgr.D00594 I 0.901
Cla019994 Citrullus lanatus Cla019994 I 0.901
PGSC0003DMG400031753 Solanum tuberosum PGSC0003DMG400031753 I 0.901
PDK_20s1410211g002 Phoenix dactylifera PDK_20s1410211g002 I 0.901
AMTR_s00021p00209320 Amborella trichopoda AMTR_s00021p00209320 I 0.896
PK25812.1 Cannabis sativa PK25812.1 I 0.896
OMERI02G35510 Oryza meridionalis OMERI02G35510 I 0.895
OLONG_018487 Oryza longistaminata OLONG_018487 I 0.895
BRADI2G33307 Brachypodium distachyon BRADI2G33307 I 0.894
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I 0.892
Cucsa.046530 Cucumis sativus Cucsa.046530 I 0.892
BRADI2G46197 Brachypodium distachyon BRADI2G46197 I 0.891
Aquca_002_01098 Aquilegia coerulea Aquca_002_01098 I 0.890
evm.TU.supercontig_83.99 Carica papaya evm.TU.supercontig_83.99 I 0.889
Aquca_051_00040 Aquilegia coerulea Aquca_051_00040 I 0.889
Sb09g006015 Sorghum bicolor Sb09g006015 I 0.887
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I 0.885
Carubv10005324m.g Capsella rubella Carubv10005324m.g I 0.884
Bra011034 Brassica rapa Bra011034 I 0.884
Bo1g017410 Brassica oleracea Bo1g017410 I 0.884
NAC073 Arabidopsis thaliana AT4G28500 D 0.884
cassava17166.m1 Manihot esculenta cassava17166.m1 I 0.884
Thhalv10025819m.g Eutrema salsugineum Thhalv10025819m.g I 0.884
Cagra.1225s0041 Capsella grandiflora Cagra.1225s0041 I 0.884
OB05G33280 Oryza brachyantha OB05G33280 I 0.883
GLYMA02G11140 Glycine max GLYMA02G11140 I 0.882
TCM_011869 Theobroma cacao TCM_011869 I 0.882
TRIUR3_31341 Triticum urartu TRIUR3_31341 I 0.881
F775_07141 Aegilops tauschii F775_07141 I 0.881
GLYMA01G22510 Glycine max GLYMA01G22510 I 0.881
ANAC073 Arabidopsis lyrata Al_scaffold_0007_1273 I 0.880
OBART05G25770 Oryza barthii OBART05G25770 I 0.879
BGIOSGA020356 Oryza indica BGIOSGA020356 I 0.879
OS05G0563000 Oryza sativa OS05G0563000 I 0.879
ONIVA05G27670 Oryza nivara ONIVA05G27670 I 0.879
ORGLA05G0222500 Oryza glaberrima ORGLA05G0222500 I 0.879
OPUNC05G23360 Oryza punctata OPUNC05G23360 I 0.879
ORUFI05G27670 Oryza rufipogon ORUFI05G27670 I 0.879
OGLUM05G27400 Oryza glumaepatula OGLUM05G27400 I 0.879
LPERR05G05170 Leersia perrieri LPERR05G05170 I 0.878
ORUFI05G06530 Oryza rufipogon ORUFI05G06530 I 0.877
OBART05G06140 Oryza barthii OBART05G06140 I 0.877
Pavir.J36494 Panicum virgatum Pavir.J36494 I 0.874
Sb09g006018 Sorghum bicolor Sb09g006018 I 0.874
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I 0.874
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I 0.873
SOG1 Vitis vinifera VIT_01s0011g02990 I 0.871
GSMUA_Achr2G09080_001 Musa acuminata GSMUA_Achr2G09080_001 I 0.871
LPERR05G21400 Leersia perrieri LPERR05G21400 I 0.871