CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK18158.1
(
Cannabis sativa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
PK18158.1
T299345_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC094
M07236_2.00
Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR
Dap-seq
OMalley et al.(2016)
ANAC094_col_a
0.893
0.737
JUB1
M07191_2.00
Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR
Dap-seq
OMalley et al.(2016)
ANAC042_col_a
0.887
0.825
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK18158.1
NAC/NAM
24
149
LPGFRFHPTDEELVGFYLKRKVNNKPITIDLIKSIDIYKYDPWDLPKGSSSGGDKEWYFFCKRGRKYKNSVRPNRVTGSGFWKATGIDKPIVRNNNHIGLKKTLVYYRGSAGKGTKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Cannabis sativa
TFs
184 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy