CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK23481.1
(
Cannabis sativa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
PK23481.1
T299358_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK23481.1
NAC/NAM
43
176
PPGFRFHPRDEELVCDYLINKITQSDSTLMIEVDLNKSEPWDIPERACVGGKEWYFYSQRDRKYATGLRTNRATASGYWKATGKDRPIFGKGKGVKSHSNNNNGLVGMRKTLVFYQGRAPKGKKTDWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Cannabis sativa
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene10469-v1.0-hybrid
Fragaria vesca
gene10469-v1.0-hybrid
N
0.995
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.994
Pm011234
Prunus mume
Pm011234
N
0.991
MDP0000298182
Malus domestica
MDP0000298182
N
0.990
SapurV1A.0284s0040
Salix purpurea
SapurV1A.0284s0040
N
0.988
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.986
MTR_2g064470
Medicago truncatula
MTR_2g064470
N
0.985
Ca_13537
Cicer arietinum
Ca_13537
N
0.985
chr3.CM0279.430.nd
Lotus japonicus
chr3.CM0279.430.nd
N
0.984
GLYMA15G40510
Glycine max
GLYMA15G40510
N
0.982
29650.m000275
Ricinus communis
29650.m000275
N
0.979
Cla023574
Citrullus lanatus
Cla023574
N
0.976
TCM_032479
Theobroma cacao
TCM_032479
N
0.976
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.968
OMERI03G00460
Oryza meridionalis
OMERI03G00460
N
0.966
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.959
AMTR_s00067p00064350
Amborella trichopoda
AMTR_s00067p00064350
N
0.958
MDP0000216357
Malus domestica
MDP0000216357
N
0.958
GSMUA_Achr9G10210_001
Musa acuminata
GSMUA_Achr9G10210_001
N
0.957
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.949
GSMUA_Achr11G22760_001
Musa acuminata
GSMUA_Achr11G22760_001
N
0.944
GSMUA_Achr6G36550_001
Musa acuminata
GSMUA_Achr6G36550_001
N
0.943
GSMUA_Achr3G23360_001
Musa acuminata
GSMUA_Achr3G23360_001
N
0.939
GSMUA_AchrUn_randomG17260_001
Musa acuminata
GSMUA_AchrUn_randomG17260_001
N
0.938
GSMUA_Achr6G30050_001
Musa acuminata
GSMUA_Achr6G30050_001
N
0.935
VIT_19s0027g00230
Vitis vinifera
VIT_19s0027g00230
N
0.934
Sb10g027100
Sorghum bicolor
Sb10g027100
N
0.929
POPTR_0002s15530
Populus trichocarpa
POPTR_0002s15530
N
0.928
SapurV1A.0085s0410
Salix purpurea
SapurV1A.0085s0410
N
0.914
SapurV1A.0024s0360
Salix purpurea
SapurV1A.0024s0360
N
0.908
Si006975m.g
Setaria italica
Si006975m.g
N
0.900
Ciclev10021117m.g
Citrus clementina
Ciclev10021117m.g
N
0.899
OLONG_010248
Oryza longistaminata
OLONG_010248
N
0.896
SapurV1A.0024s0350
Salix purpurea
SapurV1A.0024s0350
N
0.896
BRADI1G32660
Brachypodium distachyon
BRADI1G32660
I
0.896
GRMZM2G063522
Zea mays
GRMZM2G063522
I
0.892
Pavir.Db00380
Panicum virgatum
Pavir.Db00380
N
0.891
Pavir.J36955
Panicum virgatum
Pavir.J36955
I
0.890
NAC1
Arabidopsis lyrata
Al_scaffold_0001_4992
N
0.886
NAC021
Arabidopsis thaliana
AT1G56010
N
0.886
Bra030820
Brassica rapa
Bra030820
N
0.885
Bo3g185760
Brassica oleracea
Bo3g185760
N
0.885
OLONG_025732
Oryza longistaminata
OLONG_025732
I
0.876
F775_30297
Aegilops tauschii
F775_30297
I
0.875
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.875
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.875
BGIOSGA011685
Oryza indica
BGIOSGA011685
I
0.873
POPTR_0007s08420
Populus trichocarpa
POPTR_0007s08420
N
0.027