PK26741.1 (Cannabis sativa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 PK26741.1 T299368_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC92
M00979_2.00
Arabidopsis thaliana
NNDYACGBHA

TDVCGTRHNN
PBM
Lindemose et al.(2014)
ANAC092
0.950 0.868
NAC92
M00730_2.00
Arabidopsis thaliana
DYACGNHAN

NTDNCGTRH
PBM
Chang et al.(2013)
pTH7335
0.950 0.868
NAC92
M07234_2.00
Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY

RTWRCKTGHDNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a
0.950 0.868
NAC92
M07235_2.00
Arabidopsis thaliana
WRCKTGTNNNDCAMG

CKTGHNNNACAMGYW
Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a
0.950 0.868
NAC59
M11080_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC059_01
0.948 0.851
NAC100
M02375_2.00
Arabidopsis thaliana
NBAMKNHWNN

NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH7239
0.938 0.842
ANAC100
M02377_2.00
Arabidopsis lyrata
DYACGYHANN

NNTDRCGTRH
PBM
Weirauch et al.(2014)
pTH9234
0.934 0.842
NAC098
M07239_2.00
Arabidopsis thaliana
CKTGTNNNDYAMGYHA

TDRCKTRHNNNACAMG
Dap-seq
OMalley et al.(2016)
CUC2_colamp_a
0.934 0.851
NAC098
M07240_2.00
Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG

CKTGWDNNDCAMGNWANNN
Dap-seq
OMalley et al.(2016)
CUC2_col
0.934 0.851
NAC079
M02373_2.00
Arabidopsis thaliana
TTGCGTRY

RYACGCAA
PBM
Weirauch et al.(2014)
pTH7399
0.928 0.816
NAC079
M07228_2.00
Arabidopsis thaliana
CBWNHNNHACACGYWA

TWRCGTGTDNNDNWVG
Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a
0.928 0.816
NAC079
M07229_2.00
Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH

DTWRCKTGWDNNDBAMGNWAN
Dap-seq
OMalley et al.(2016)
ANAC079_col
0.928 0.816
ANAC080
M02376_2.00
Arabidopsis lyrata
NBAMKNHWNN

NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH9230
0.927 0.816
NAC054
M07205_2.00
Arabidopsis thaliana
CKTVHNNHRCACGYHANCW

WGNTDRCGTGYDNNDBAMG
Dap-seq
OMalley et al.(2016)
CUC1_colamp_a
0.914 0.807
NAC054
M07206_2.00
Arabidopsis thaliana
TWNCKTGHNNNDCAMG

CKTGHNNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
CUC1_col_v31
0.914 0.807
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB

VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.908 0.825
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA

TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.908 0.825
e_gw1.288.15.1
M02381_2.00
Physcomitrella patens
NNNBAMKNHW

WDNMKTVNNN
PBM
Weirauch et al.(2014)
pTH8467
0.893 0.772
NAC031
M07182_2.00
Arabidopsis thaliana
NTWDCKTGTNNHWYACGY

RCGTRWDNNACAMGHWAN
Dap-seq
OMalley et al.(2016)
CUC3_col_a
0.886 0.675
NAC031
M07183_2.00
Arabidopsis thaliana
CKTGTNNHDCACGYHA

TDRCGTGHDNNACAMG
Dap-seq
OMalley et al.(2016)
CUC3_colamp_a
0.886 0.675
e_gw1.159.34.1
M02379_2.00
Physcomitrella patens
DYACGNHANN

NNTDNCGTRH
PBM
Weirauch et al.(2014)
pTH8477
0.880 0.772
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK26741.1 NAC/NAM 42 166

Links

Other NAC/NAM family TFs
Other Cannabis sativa TFs

Invalid Input OrderBy

374 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action