chr1.CM0141.310.nc (Lotus japonicus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 chr1.CM0141.310.nc T299380_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC098
M07239_2.00
Arabidopsis thaliana
CKTGTNNNDYAMGYHA

TDRCKTRHNNNACAMG
Dap-seq
OMalley et al.(2016)
CUC2_colamp_a
0.923 0.781
NAC098
M07240_2.00
Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG

CKTGWDNNDCAMGNWANNN
Dap-seq
OMalley et al.(2016)
CUC2_col
0.923 0.781
NAC100
M02375_2.00
Arabidopsis thaliana
NBAMKNHWNN

NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH7239
0.899 0.754
NAC59
M11080_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC059_01
0.894 0.772
ANAC100
M02377_2.00
Arabidopsis lyrata
DYACGYHANN

NNTDRCGTRH
PBM
Weirauch et al.(2014)
pTH9234
0.894 0.754
NAC92
M00979_2.00
Arabidopsis thaliana
NNDYACGBHA

TDVCGTRHNN
PBM
Lindemose et al.(2014)
ANAC092
0.887 0.754
NAC92
M00730_2.00
Arabidopsis thaliana
DYACGNHAN

NTDNCGTRH
PBM
Chang et al.(2013)
pTH7335
0.887 0.754
NAC92
M07234_2.00
Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY

RTWRCKTGHDNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a
0.887 0.754
NAC92
M07235_2.00
Arabidopsis thaliana
WRCKTGTNNNDCAMG

CKTGHNNNACAMGYW
Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a
0.887 0.754
ANAC080
M02376_2.00
Arabidopsis lyrata
NBAMKNHWNN

NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH9230
0.886 0.754
NAC079
M02373_2.00
Arabidopsis thaliana
TTGCGTRY

RYACGCAA
PBM
Weirauch et al.(2014)
pTH7399
0.885 0.754
NAC079
M07228_2.00
Arabidopsis thaliana
CBWNHNNHACACGYWA

TWRCGTGTDNNDNWVG
Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a
0.885 0.754
NAC079
M07229_2.00
Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH

DTWRCKTGWDNNDBAMGNWAN
Dap-seq
OMalley et al.(2016)
ANAC079_col
0.885 0.754
e_gw1.288.15.1
M02381_2.00
Physcomitrella patens
NNNBAMKNHW

WDNMKTVNNN
PBM
Weirauch et al.(2014)
pTH8467
0.880 0.763
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0141.310.nc NAC/NAM 17 142

Links

Other NAC/NAM family TFs
Other Lotus japonicus TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Homez Mus musculus ENSMUSG00000057156 D 0.000
HOMEZ Homo sapiens ENSG00000215271 D 0.000
HOMEZ Anolis carolinensis ENSACAG00000007379 I 0.000
HOMEZ Otolemur garnettii ENSOGAG00000032616 I 0.000
ENSPANG00000004893 Papio anubis ENSPANG00000004893 I 0.000
HOMEZ Procavia capensis ENSPCAG00000005821 I 0.000
ENSPPYG00000005662 Pongo abelii ENSPPYG00000005662 I 0.000
HOMEZ Pan troglodytes ENSPTRG00000006165 I 0.000
Homez Rattus norvegicus ENSRNOG00000014887 I 0.000
ENSSHAG00000014748 Sarcophilus harrisii ENSSHAG00000014748 I 0.000
HOMEZ Sus scrofa ENSSSCG00000028190 I 0.000
ENSSTOG00000020653 Ictidomys tridecemlineatus ENSSTOG00000020653 I 0.000
ENSTSYG00000004720 Tarsius syrichta ENSTSYG00000004720 I 0.000
ENSMMUP00000019353 Macaca fascicularis ENSMMUP00000019353 I 0.000
Myotis_brandtii_HOMEZ_10009432 Myotis brandtii Myotis_brandtii_HOMEZ_10009432 I 0.000
HOMEZ Oryctolagus cuniculus ENSOCUG00000012510 I 0.000
ENSOARG00000019342 Ovis aries ENSOARG00000019342 I 0.000
ENSAMEG00000007717 Ailuropoda melanoleuca ENSAMEG00000007717 I 0.000
HOMEZ Bos taurus ENSBTAG00000032686 I 0.000
HOMEZ Canis familiaris ENSCAFG00000011468 I 0.000
ENSCPOG00000025949 Cavia porcellus ENSCPOG00000025949 I 0.000
ENSCSAG00000016052 Chlorocebus sabaeus ENSCSAG00000016052 I 0.000
HOMEZ Felis catus ENSFCAG00000030011 I 0.000
HOMEZ Gorilla gorilla ENSGGOG00000002195 I 0.000
HOMEZ Myotis lucifugus ENSMLUG00000004922 I 0.000
HOMEZ Macaca mulatta ENSMMUG00000014744 I 0.000
HOMEZ Monodelphis domestica ENSMODG00000024443 I 0.000
ENSMPUG00000006797 Mustela putorius furo ENSMPUG00000006797 I 0.000
HOMEZ Ornithorhynchus anatinus ENSOANG00000007642 I 0.000
Pvit_09633 Pogona vitticeps Pvit_09633 N 0.000