chr3.CM0176.150.nc (Lotus japonicus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 chr3.CM0176.150.nc T299397_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
JUB1
M07191_2.00
Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY

RYDVCGKNDNNNNNACGGMR
Dap-seq
OMalley et al.(2016)
ANAC042_col_a
0.959 0.868
ANAC094
M07236_2.00
Arabidopsis thaliana
YDCCGTNNNNNHNACGBH

DVCGTNDNNNNNACGGHR
Dap-seq
OMalley et al.(2016)
ANAC094_col_a
0.875 0.711
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0176.150.nc NAC/NAM 23 152

Links

Other NAC/NAM family TFs
Other Lotus japonicus TFs

Invalid Input OrderBy

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action