CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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myrf
(
Xenopus tropicalis
)
Ndt80/PhoG
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05224 (NDT80_PhoG)
IPR007888
XB-GENE-1020968
T300245_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYRF
M02385_2.00
Homo sapiens
TGGTACCA
TGGTACCA
PBM
Weirauch et al.(2014)
pTH9310
0.839
0.839
Myrf
M02386_2.00
Mus musculus
NNGTRHSNNN
NNNSDYACNN
PBM
Weirauch et al.(2014)
pTH8554
0.839
0.839
myrf
M02384_2.00
Danio rerio
TGGTACCR
YGGTACCA
PBM
Weirauch et al.(2014)
pTH8654
0.818
0.818
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002937694
Ndt80/PhoG
442
589
AFVCQKKNHFQVTVYIGMIGEPKYVKTPEGILPIECFYLKLNGVKLEAINQSISIEQSQSDRSKRPFHPVTLSLPPDQVTKVTVGRLHFSETTANNMRKKGKPNPDQRYFLLVVALQVQAQNQTYLVAAQSSERIIVRASNPGQFESD
Links
Other
Ndt80/PhoG
family TFs
Other
Xenopus tropicalis
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy