Bra009123 (Brassica rapa)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01422 (zf-NF-X1) IPR000967 Bra009123 T300386_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra009123.1-P NFX 198 215
Bra009123.1-P NFX 233 268
Bra009123.1-P NFX 303 321
Bra009123.1-P NFX 357 376
Bra009123.1-P NFX 410 428
Bra009123.1-P NFX 431 455
Bra009123.1-P NFX 502 514
Bra009123.1-P NFX 605 616
Bra009123.1-P NFX 646 663
Bra009123.1-P NFX 709 728

Links

Other NFX family TFs
Other Brassica rapa TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo9g177030 Brassica oleracea Bo9g177030 N 0.994
POPTR_0010s19600 Populus trichocarpa POPTR_0010s19600 N 0.821
MTR_3g070780 Medicago truncatula MTR_3g070780 N 0.775
SapurV1A.0061s0270 Salix purpurea SapurV1A.0061s0270 N 0.775
Si000223m.g Setaria italica Si000223m.g N 0.775
Eucgr.J00206 Eucalyptus grandis Eucgr.J00206 N 0.760
Ca_13412 Cicer arietinum Ca_13412 N 0.757
gene20971-v1.0-hybrid Fragaria vesca gene20971-v1.0-hybrid N 0.753
Cagra.1504s0067 Capsella grandiflora Cagra.1504s0067 N 0.751
28162.m000128 Ricinus communis 28162.m000128 N 0.751
Carubv10003051m.g Capsella rubella Carubv10003051m.g N 0.751
Thhalv10012642m.g Eutrema salsugineum Thhalv10012642m.g N 0.750
LjT47B05.50.nd Lotus japonicus LjT47B05.50.nd N 0.746
NFXL2 Arabidopsis thaliana AT5G05660 N 0.745
PK03289.1 Cannabis sativa PK03289.1 N 0.740
evm.TU.supercontig_19.173 Carica papaya evm.TU.supercontig_19.173 N 0.737
Gorai.010G197800 Gossypium raimondii Gorai.010G197800 N 0.734
TCM_042496 Theobroma cacao TCM_042496 N 0.731
ATNFXL2 Vitis vinifera VIT_13s0067g00920 N 0.723
Solyc06g051570.2 Solanum lycopersicum Solyc06g051570.2 N 0.722
Pavir.J07154 Panicum virgatum Pavir.J07154 N 0.716
GRMZM2G139369 Zea mays GRMZM2G139369 N 0.716
Sb03g005310 Sorghum bicolor Sb03g005310 N 0.710
OPUNC01G03540 Oryza punctata OPUNC01G03540 N 0.705
BGIOSGA002351 Oryza indica BGIOSGA002351 N 0.705