CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA17585
(
Drosophila pseudoobscura
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
FBgn0077596
T300579_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
stc
M03922_2.00
Drosophila melanogaster
YATYACMWKGTRATA
TATYACMWKGTRATR
SELEX
Nitta et al.(2015)
stc_1
0.924
0.924
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0279018
NFX
450
467
CSHACTLLCHPGPCPPCQ
FBpp0279018
NFX
503
521
CGEHHCKEECHSGKCAACP
FBpp0279018
NFX
561
579
CGNHKCKDSCHAGNCRPCK
FBpp0279018
NFX
620
642
CGKPAHPHQCGSKCHLGQCPPCQ
FBpp0279018
NFX
709
727
CGKHKCDQPCHRGNCPPCY
FBpp0279018
NFX
820
846
CGRHKCIKPCHEGPCQSSPSDICRQSC
FBpp0279018
NFX
853
872
CGHKCASACHEGACPETPCK
Links
Other
NFX
family TFs
Other
Drosophila pseudoobscura
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GL26033
Drosophila persimilis
FBgn0163615
I
1.000
GE20891
Drosophila yakuba
FBgn0238180
I
0.931
GG25149
Drosophila erecta
FBgn0117274
I
0.924
stc
Drosophila melanogaster
FBgn0001978
D
0.924
GF14341
Drosophila ananassae
FBgn0091368
I
0.901
GD23996
Drosophila simulans
FBgn0195356
I
0.901
GM15949
Drosophila sechellia
FBgn0170865
I
0.893
GK18317
Drosophila willistoni
FBgn0220315
I
0.864
GJ11954
Drosophila virilis
FBgn0199206
I
0.863
GH10921
Drosophila grimshawi
FBgn0118402
I
0.855
GI13324
Drosophila mojavensis
FBgn0136081
I
0.855
MDOA012045
Musca domestica
MDOA012045
I
0.758