CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB01G13760
(
Oryza brachyantha
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
OB01G13760
T300719_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB01G13760.1
NFX
189
222
CGDVCGRRLNANLDSGCEHTCLLLCHPGPCPPCP
OB01G13760.1
NFX
258
276
CGIHRCPVDCHDGPCPPCA
OB01G13760.1
NFX
311
329
CGKHSCERGCHAGKCGECP
OB01G13760.1
NFX
365
384
CGRHKCPERCHRGSCVETCR
OB01G13760.1
NFX
418
436
CGRHACRRRCCEGDCAPCP
OB01G13760.1
NFX
445
463
CGNHKCLSPCHRGSCSPCP
OB01G13760.1
NFX
507
522
ECQPHKCHYGACPPCK
OB01G13760.1
NFX
613
624
CGNHYCTKGCHV
OB01G13760.1
NFX
660
679
PPCSHPCPLPCHLDDCPPCK
Links
Other
NFX
family TFs
Other
Oryza brachyantha
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART01G03880
Oryza barthii
OBART01G03880
N
0.950
OGLUM01G04180
Oryza glumaepatula
OGLUM01G04180
N
0.950
ONIVA01G04320
Oryza nivara
ONIVA01G04320
N
0.950
ORGLA01G0034200
Oryza glaberrima
ORGLA01G0034200
N
0.950
OS01G0158900
Oryza sativa
OS01G0158900
N
0.950
ORUFI01G03990
Oryza rufipogon
ORUFI01G03990
N
0.950
OLONG_021562
Oryza longistaminata
OLONG_021562
N
0.950
OPUNC01G03540
Oryza punctata
OPUNC01G03540
N
0.949
LPERR01G03530
Leersia perrieri
LPERR01G03530
N
0.943
BGIOSGA002351
Oryza indica
BGIOSGA002351
N
0.943
OMERI01G03770
Oryza meridionalis
OMERI01G03770
N
0.918
Si000223m.g
Setaria italica
Si000223m.g
N
0.795
PK03289.1
Cannabis sativa
PK03289.1
N
0.767
LjT47B05.50.nd
Lotus japonicus
LjT47B05.50.nd
N
0.767
Ciclev10030684m.g
Citrus clementina
Ciclev10030684m.g
N
0.755
Sb03g005310
Sorghum bicolor
Sb03g005310
N
0.751
MTR_3g070780
Medicago truncatula
MTR_3g070780
N
0.750
Pavir.J07154
Panicum virgatum
Pavir.J07154
N
0.746
GRMZM2G139369
Zea mays
GRMZM2G139369
N
0.746
POPTR_0010s19600
Populus trichocarpa
POPTR_0010s19600
N
0.724
GLYMA18G03080
Glycine max
GLYMA18G03080
N
0.704