POPTR_0015s05030 (Populus trichocarpa)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01422 (zf-NF-X1) IPR000967 POPTR_0015s05030 T300769_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0015s05030.1 NFX 235 252
POPTR_0015s05030.1 NFX 290 308
POPTR_0015s05030.1 NFX 354 372
POPTR_0015s05030.1 NFX 412 430
POPTR_0015s05030.1 NFX 470 481
POPTR_0015s05030.1 NFX 508 526
POPTR_0015s05030.1 NFX 565 582
POPTR_0015s05030.1 NFX 618 635

Links

Other NFX family TFs
Other Populus trichocarpa TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.865
27791.m000083 Ricinus communis 27791.m000083 N 0.844
MDP0000280911 Malus domestica MDP0000280911 N 0.825
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.823
Bo8g059130 Brassica oleracea Bo8g059130 N 0.823
Pm025049 Prunus mume Pm025049 N 0.816
Bra018458 Brassica rapa Bra018458 N 0.816
POPTR_0012s04070 Populus trichocarpa POPTR_0012s04070 N 0.794
mgf004430m Mimulus guttatus mgf004430m N 0.780
Ca_16794 Cicer arietinum Ca_16794 N 0.776
MDP0000603846 Malus domestica MDP0000603846 N 0.754
VIT_17s0000g01920 Vitis vinifera VIT_17s0000g01920 N 0.750
cassava4965.m1 Manihot esculenta cassava4965.m1 N 0.738
SapurV1A.0665s0040 Salix purpurea SapurV1A.0665s0040 N 0.738
Thhalv10006708m.g Eutrema salsugineum Thhalv10006708m.g N 0.732
Solyc03g118420.2 Solanum lycopersicum Solyc03g118420.2 N 0.731
TCM_012484 Theobroma cacao TCM_012484 N 0.731
Lus10034470.g Linum usitatissimum Lus10034470.g N 0.731
Lus10025071.g Linum usitatissimum Lus10025071.g N 0.725
Bostr.13671s0471 Boechera stricta Bostr.13671s0471 N 0.725
TCM_017029 Theobroma cacao TCM_017029 N 0.722
GLYMA08G06040 Glycine max GLYMA08G06040 N 0.719
Eucgr.H00552 Eucalyptus grandis Eucgr.H00552 N 0.713
Bostr.15697s0430 Boechera stricta Bostr.15697s0430 N 0.711
Gorai.006G058600 Gossypium raimondii Gorai.006G058600 N 0.711
Cucsa.122080 Cucumis sativus Cucsa.122080 N 0.706
GLYMA09G30343 Glycine max GLYMA09G30343 N 0.706
Cla018720 Citrullus lanatus Cla018720 N 0.703
Bo5g010600 Brassica oleracea Bo5g010600 N 0.700
GLYMA07G11834 Glycine max GLYMA07G11834 N 0.700
Bra019958 Brassica rapa Bra019958 N 0.700