TCM_012484 (Theobroma cacao)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01422 (zf-NF-X1) IPR000967 TCM_012484 T300824_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY21126 NFX 220 237
EOY21126 NFX 275 293
EOY21126 NFX 339 357
EOY21126 NFX 397 415
EOY21126 NFX 455 466
EOY21126 NFX 493 511
EOY21126 NFX 550 567
EOY21126 NFX 603 623
EOY21126 NFX 631 662

Links

Other NFX family TFs
Other Theobroma cacao TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_017029 Theobroma cacao TCM_017029 N 0.950
Gorai.006G058600 Gossypium raimondii Gorai.006G058600 N 0.918
POPTR_0012s04070 Populus trichocarpa POPTR_0012s04070 N 0.856
cassava4965.m1 Manihot esculenta cassava4965.m1 N 0.856
Eucgr.H00552 Eucalyptus grandis Eucgr.H00552 N 0.844
Lus10034470.g Linum usitatissimum Lus10034470.g N 0.838
PK00983.1 Cannabis sativa PK00983.1 N 0.838
ATNFXL1 Arabidopsis thaliana AT1G10170 N 0.838
Lus10025071.g Linum usitatissimum Lus10025071.g N 0.831
orange1.1g001378m.g Citrus sinensis orange1.1g001378m.g N 0.827
Ciclev10018607m.g Citrus clementina Ciclev10018607m.g N 0.827
Eucgr.K02284 Eucalyptus grandis Eucgr.K02284 N 0.825
ATNFXL1 Arabidopsis lyrata fgenesh2_kg.1__1086__AT1G10170.1 N 0.825
GLYMA08G06040 Glycine max GLYMA08G06040 N 0.825
GLYMA09G30343 Glycine max GLYMA09G30343 N 0.825
Cucsa.122080 Cucumis sativus Cucsa.122080 N 0.825
Bo5g010600 Brassica oleracea Bo5g010600 N 0.819
Bra019958 Brassica rapa Bra019958 N 0.819
Aquca_044_00077 Aquilegia coerulea Aquca_044_00077 N 0.812
GLYMA07G11834 Glycine max GLYMA07G11834 N 0.812
Aquca_032_00102 Aquilegia coerulea Aquca_032_00102 N 0.800
Cagra.1508s0074 Capsella grandiflora Cagra.1508s0074 N 0.794
Carubv10008145m.g Capsella rubella Carubv10008145m.g N 0.794
fgenesh1_pg.C_scaffold_1003098 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003098 N 0.787
Cla018720 Citrullus lanatus Cla018720 N 0.781
Bra031704 Brassica rapa Bra031704 N 0.764
GRMZM2G087787 Zea mays GRMZM2G087787 N 0.762
MDP0000280911 Malus domestica MDP0000280911 N 0.756
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.756
Sb04g038100 Sorghum bicolor Sb04g038100 N 0.756
Sb10g009070 Sorghum bicolor Sb10g009070 N 0.756
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.750
Pm025049 Prunus mume Pm025049 N 0.750
Bo8g059130 Brassica oleracea Bo8g059130 N 0.750
27791.m000083 Ricinus communis 27791.m000083 N 0.744
Bra018458 Brassica rapa Bra018458 N 0.738
POPTR_0015s05030 Populus trichocarpa POPTR_0015s05030 N 0.731
Ca_16794 Cicer arietinum Ca_16794 N 0.713