CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_17s0000g01920
(
Vitis vinifera
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
VIT_17s0000g01920
T300856_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_17s0000g01920.t01
NFX
232
249
CPHVCVLQCHPGPCPPCK
VIT_17s0000g01920.t01
NFX
287
305
CGRHRCERMCHVGACDPCQ
VIT_17s0000g01920.t01
NFX
351
369
CGNHDCDEICHPGPCGDCN
VIT_17s0000g01920.t01
NFX
409
427
CGMHFCKDTCHAGDCAPCL
VIT_17s0000g01920.t01
NFX
466
477
CGRHRCSERCCP
VIT_17s0000g01920.t01
NFX
504
522
CGQHSCENLCHSGHCPPCL
VIT_17s0000g01920.t01
NFX
614
633
CGMHACGRTCHPPPCDSSCA
VIT_17s0000g01920.t01
NFX
642
673
CGQTCGAPRRDCRHTCTAPCHPSSPCPDSRCN
Links
Other
NFX
family TFs
Other
Vitis vinifera
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.13671s0471
Boechera stricta
Bostr.13671s0471
N
0.840
Thhalv10006708m.g
Eutrema salsugineum
Thhalv10006708m.g
N
0.833
Solyc03g118420.2
Solanum lycopersicum
Solyc03g118420.2
N
0.812
Bostr.15697s0430
Boechera stricta
Bostr.15697s0430
N
0.806
chr2.LjT01H08.70.nc
Lotus japonicus
chr2.LjT01H08.70.nc
N
0.799
GRMZM2G307823
Zea mays
GRMZM2G307823
N
0.771
GRMZM2G409627
Zea mays
GRMZM2G409627
N
0.771
MTR_4g027040
Medicago truncatula
MTR_4g027040
N
0.764
MDP0000280911
Malus domestica
MDP0000280911
N
0.757
Pm025049
Prunus mume
Pm025049
N
0.750
POPTR_0015s05030
Populus trichocarpa
POPTR_0015s05030
N
0.750
PRUPE_ppa000543mg
Prunus persica
PRUPE_ppa000543mg
N
0.743
Bo8g059130
Brassica oleracea
Bo8g059130
N
0.736
27791.m000083
Ricinus communis
27791.m000083
N
0.729
Bra018458
Brassica rapa
Bra018458
N
0.729
AMTR_s00060p00124510
Amborella trichopoda
AMTR_s00060p00124510
N
0.729
SapurV1A.0082s0290
Salix purpurea
SapurV1A.0082s0290
N
0.722
Cagra.4395s0205
Capsella grandiflora
Cagra.4395s0205
N
0.722
PGSC0003DMG400014182
Solanum tuberosum
PGSC0003DMG400014182
N
0.708
SapurV1A.0665s0040
Salix purpurea
SapurV1A.0665s0040
N
0.701