Cla018720 (Citrullus lanatus)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 Cla018720 T300898_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla018720 NFX 244 261
Cla018720 NFX 299 317
Cla018720 NFX 357 381
Cla018720 NFX 421 439
Cla018720 NFX 479 490
Cla018720 NFX 511 535
Cla018720 NFX 579 591
Cla018720 NFX 627 644
Cla018720 NFX 655 686

Links

Other NFX family TFs
Other Citrullus lanatus TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.122080 Cucumis sativus Cucsa.122080 N 0.938
cassava4965.m1 Manihot esculenta cassava4965.m1 N 0.819
POPTR_0012s04070 Populus trichocarpa POPTR_0012s04070 N 0.806
ATNFXL1 Arabidopsis thaliana AT1G10170 N 0.794
Bra019958 Brassica rapa Bra019958 N 0.794
Bo5g010600 Brassica oleracea Bo5g010600 N 0.794
Gorai.006G058600 Gossypium raimondii Gorai.006G058600 N 0.792
orange1.1g001378m.g Citrus sinensis orange1.1g001378m.g N 0.790
Ciclev10018607m.g Citrus clementina Ciclev10018607m.g N 0.790
ATNFXL1 Arabidopsis lyrata fgenesh2_kg.1__1086__AT1G10170.1 N 0.787
TCM_017029 Theobroma cacao TCM_017029 N 0.785
Eucgr.H00552 Eucalyptus grandis Eucgr.H00552 N 0.781
TCM_012484 Theobroma cacao TCM_012484 N 0.781
GLYMA09G30343 Glycine max GLYMA09G30343 N 0.781
Eucgr.K02284 Eucalyptus grandis Eucgr.K02284 N 0.778
GLYMA07G11834 Glycine max GLYMA07G11834 N 0.775
Aquca_044_00077 Aquilegia coerulea Aquca_044_00077 N 0.775
GLYMA08G06040 Glycine max GLYMA08G06040 N 0.775
Bra031704 Brassica rapa Bra031704 N 0.770
Cagra.1508s0074 Capsella grandiflora Cagra.1508s0074 N 0.762
Carubv10008145m.g Capsella rubella Carubv10008145m.g N 0.762
Lus10034470.g Linum usitatissimum Lus10034470.g N 0.762
PK00983.1 Cannabis sativa PK00983.1 N 0.762
Lus10025071.g Linum usitatissimum Lus10025071.g N 0.762
Aquca_032_00102 Aquilegia coerulea Aquca_032_00102 N 0.756
fgenesh1_pg.C_scaffold_1003098 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003098 N 0.756
Sb10g009070 Sorghum bicolor Sb10g009070 N 0.756
GRMZM2G087787 Zea mays GRMZM2G087787 N 0.756
Sb04g038100 Sorghum bicolor Sb04g038100 N 0.750
27791.m000083 Ricinus communis 27791.m000083 N 0.723
MDP0000280911 Malus domestica MDP0000280911 N 0.723
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.716
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.716
Bra018458 Brassica rapa Bra018458 N 0.716
Pm025049 Prunus mume Pm025049 N 0.716
Bo8g059130 Brassica oleracea Bo8g059130 N 0.710
POPTR_0015s05030 Populus trichocarpa POPTR_0015s05030 N 0.703
mgf004430m Mimulus guttatus mgf004430m N 0.703