CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava20878.m1
(
Manihot esculenta
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
cassava20878.m1
T300921_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava20878.m1
NFX
148
165
CGHYCLLLCHPGPCASCP
cassava20878.m1
NFX
200
218
CGTHKCKERCHDGDCPPCQ
cassava20878.m1
NFX
253
271
CGKHVCERGCHSGECGQCP
cassava20878.m1
NFX
307
326
CGLHRCHERCHRGGCIETCR
cassava20878.m1
NFX
360
378
CGRHACKRRCCDGDCPPCG
cassava20878.m1
NFX
381
405
CGKRLRCKNHKCPAPCHRGACAPCP
cassava20878.m1
NFX
452
464
PHRCHYGACPSCQ
cassava20878.m1
NFX
473
484
CGHTCKLRCHGP
cassava20878.m1
NFX
555
566
CGNHYCTKTCHA
cassava20878.m1
NFX
598
615
CLHHCPLSCHPGECPPCK
cassava20878.m1
NFX
650
681
CGGSCHRKLPNCTHLCPEICHPGQCPSPDKCS
Links
Other
NFX
family TFs
Other
Manihot esculenta
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy