CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.13129s0405
(
Boechera stricta
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
Bostr.13129s0405
T300954_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.13129s0405.1.p
NFX
198
215
CGHCCLLLCHPGPCASCP
Bostr.13129s0405.1.p
NFX
233
268
CGHKHFSCGEVCDRVLDCDIHKCIEICHDGECPPCR
Bostr.13129s0405.1.p
NFX
303
321
CGKHVCERGCHSGSCGLCP
Bostr.13129s0405.1.p
NFX
357
376
CGYHRCPERCHRGPCLETCR
Bostr.13129s0405.1.p
NFX
410
428
CARHACRRRCCDGECPPCS
Bostr.13129s0405.1.p
NFX
431
455
CGKRLRCRNHKCQSPCHQGPCAPCP
Bostr.13129s0405.1.p
NFX
483
498
RCRKLCHITSLCRHGQ
Bostr.13129s0405.1.p
NFX
502
514
PHKCHYGACPPCR
Bostr.13129s0405.1.p
NFX
523
534
CGHKCKLRCHGP
Bostr.13129s0405.1.p
NFX
605
616
CGNHYCSFTCHP
Bostr.13129s0405.1.p
NFX
646
663
CQHPCPRRCHPGDCPPCK
Bostr.13129s0405.1.p
NFX
709
728
CTHLCPEICHPGQCPLPEKC
Links
Other
NFX
family TFs
Other
Boechera stricta
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATNFXL2
Arabidopsis lyrata
fgenesh2_kg.6__500__AT5G05660.1
N
0.959
Thhalv10012642m.g
Eutrema salsugineum
Thhalv10012642m.g
N
0.709
Cagra.1504s0067
Capsella grandiflora
Cagra.1504s0067
N
0.709
Carubv10003051m.g
Capsella rubella
Carubv10003051m.g
N
0.709